Clostridium beijerinckii NCIMB 14988: LF65_02978
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Entry
LF65_02978 CDS
T04773
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei00900
Terpenoid backbone biosynthesis
cbei01100
Metabolic pathways
cbei01110
Biosynthesis of secondary metabolites
cbei03010
Ribosome
Module
cbei_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LF65_02978
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LF65_02978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cbei03011
]
LF65_02978
Enzymes [BR:
cbei01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
LF65_02978
Ribosome [BR:
cbei03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LF65_02978
Bacteria
LF65_02978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
DUF7300
Motif
Other DBs
NCBI-ProteinID:
AJG99548
UniProt:
A0A0B5QRQ4
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All DBs
Position
complement(3274751..3276658)
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AA seq
635 aa
AA seq
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MSKVILAKNSGFCFGVQRAVNEAIRIQKEHNSKIYTLGPLIHNNDVVKYLEENNIFSIEF
EEIDKLNKGDTIVIRSHGVSETVLDTLEQKELKVINATCPFVANIQKKVKKYSKEGYHIV
ILGDKNHPEVIGINGWCDDKAIITKDGTFDEENMPHKVCVVSQTTEKMKNWEETLKNLSY
AREILAFNTICAATDVRQRSTNKISKKTDAMIVIGGKNSSNTTKLYQIAKENCENTIHIE
NAKDLPISFIKNNNINKIGVTAGASTPDWIIREVLDIMNTENNNFEDQLSLMNELDKRFV
IGDEVQGEILSKTRDSVIVSLVGYKSDGVIPFTELSAKEDPLTFADKLNIGDTINAKVIK
LQNNDGYVVLSRLEYEREEAFKELEKIYSEGSTFEVNVKEAREKGIVADYKGARIFIPAS
QIDIKFTKDKSEYVGKKLEVKLIDFSLKNPVKLVASRRVLLEESKNSEDAKAWESFNLGD
VIKGEVKRFTDFGAFVEVNGIDGLLHLSQISWNHIKKVSDVLKEGQIIDVKIIGLDKEAK
KLSLSIKELVAKPWDNAKEKYPEGSIVLGKVVRLNDFGAFVELEPGVDGLVHISKISHNR
IEHPSEVLKIGEEIKAKILSVDEENKRISLSIKDV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttattctagcaaaaaattcaggtttttgctttggagttcaaagagctgta
aatgaagctatacggattcaaaaagaacataattcgaaaatctatactttaggtccttta
atacataataatgatgtagtaaaatatttagaagaaaataatatattttctatagaattt
gaagaaatagataaattaaataaaggggatactattgttataagatctcatggtgtatct
gaaacagttttagatacacttgaacaaaaggaactaaaagtcataaatgcgacttgtcct
tttgttgctaatattcaaaaaaaagttaagaaatattcaaaagaaggatatcatatagta
atattaggagataaaaatcatccagaagtcattggaattaatggatggtgtgatgataaa
gcaattatcactaaagatggtacttttgatgaagaaaatatgccgcataaggtatgtgtt
gtatctcaaacaactgaaaagatgaagaattgggaagaaacactaaaaaacttaagttat
gcaagagaaatattagcttttaacacaatttgtgcagctactgatgttagacaaagaagt
acgaataaaatatccaaaaaaacagatgctatgatagttattggcggaaaaaatagttcg
aatactactaagttatatcaaattgctaaagaaaattgtgaaaatacaattcatattgaa
aacgcaaaagatctaccaataagttttataaaaaataataatataaacaaaataggagtt
acagctggtgcatcaacaccagattggattattagggaggtactagatattatgaacaca
gaaaataataattttgaagatcaattatcattaatgaacgaattagacaaaagatttgtt
attggcgatgaggtacaaggagaaatactttcaaagactagagattcagttatagtttca
cttgttggatacaagtcagatggagtgattccatttacagagttatctgcaaaagaagat
ccactaacatttgcagataaacttaatataggtgataccattaacgcaaaagttataaaa
ctacaaaataatgatgggtatgtagtattatcaagattagaatatgaaagagaagaagct
tttaaagaacttgaaaaaatatattcagaaggaagtacttttgaagttaatgttaaagaa
gctagagaaaaaggaatagtagcagattataaaggtgctagaatctttattccagcatca
caaattgacataaagtttactaaagataaaagtgaatatgttgggaagaaattagaagtt
aaattgatagatttttctctaaagaatcctgtaaaattagttgcttcaagaagagtttta
ttagaagaaagcaaaaattctgaagacgcaaaagcttgggagagttttaatcttggggat
gttataaaaggtgaagtaaaaagatttacagactttggagcttttgtggaagtcaatggt
atagatggattattacatttatcacaaatttcttggaatcatatcaaaaaggtaagtgat
gtattaaaagaaggtcaaattattgatgttaagatcattggtcttgataaggaagctaaa
aagctatctttaagcattaaagaacttgtagctaagccttgggataatgctaaagaaaaa
tatccagaagggtctattgtacttggtaaagtagttagattaaatgattttggtgctttt
gtagaattggaaccaggagtagatgggttagttcatatatcaaagatatctcataataga
atagagcacccttctgaagttttaaaaattggtgaagaaattaaagctaagatattaagt
gttgatgaagaaaataaaagaataagcttaagtataaaagatgtataa
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