Clostridium beijerinckii NCIMB 14988: LF65_03550
Help
Entry
LF65_03550 CDS
T04773
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03420
Nucleotide excision repair
cbei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF65_03550
03430 Mismatch repair
LF65_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_03550
Enzymes [BR:
cbei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF65_03550
DNA repair and recombination proteins [BR:
cbei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF65_03550
MMR (mismatch excision repair)
Other MMR factors
LF65_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
PhoH
cobW
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJH00107
UniProt:
A0A0B5QPB1
LinkDB
All DBs
Position
complement(3893035..3895110)
Genome browser
AA seq
691 aa
AA seq
DB search
MHYEKELERLNEYQREAVLDESDACVVNANVGSGKTTVLISKIVYLHYAKNISYKDIIVL
TFTNKAANEIKERLMISDESIKSEELEGFGTFHSVALHLLKEVLPIEKIKYEKDFLVIEP
DEELDIALQIIQEEKLKIKYKNRLKKRLEQAMVIDKEEEKISPYDDDIFKLIELLKEEKI
KQNKMSFSDILQNANLLLGEHKIEPKWIIIDEVQDSDKIQLDFIDKLKGENTKLFAVGDP
NQVIYSWRGSSLNVVYTLKHKYNAKELSLPINYRSSNAILEAARCFQQNGSRLMGARETE
NKIIVKNHYNPFNEACYLVDKIKEIHKSGVPYKEIAIFYRLQNQSQVFEDVFLKNDIPFE
VSMKKTISDSPVLNWIIKLFRFCVNPNDFSSAIYVLSNKEYGEKMTEKTARKIVKEQNII
KSELLEKMHEFLNKCSEIKIAEEIYNYFEFDKYIKPTSATYIDDKEAIYSLLNIIIEYVK
EKQMIFLDGLREFINSSALYGVNILKKDINSDIDSVKLMTLHASKGLEFSYVFITGVNYG
LIPLHTRDMEEEEEQRLFFVGITRAKDYLELSYYTNPDYHKAAPGESRYIHMIPEKLIQN
DKVKNNNVNLQELKKQIQEAKAKGKKEEVSVTEAVELPVVEEISETSTKKVSHKKYGTGK
VLKEDDMMIEVEFENYGVKEFVKAFSELEFL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcattatgaaaaagagctagaaagactaaatgaatatcaaagagaagcagtacttgat
gaaagtgatgcatgtgttgtaaatgcaaatgttggaagtggaaaaacaacagtcttaatt
tcaaaaatcgtgtatcttcattatgcaaaaaatattagttataaagatataattgtatta
acttttactaataaagctgcaaatgaaattaaagaaagattaatgatttctgatgagagt
ataaaatcagaggaattagagggctttggaacctttcatagtgtggctcttcatttgctt
aaagaagtattgccaattgaaaaaataaagtatgaaaaagactttttagtaatagagcca
gatgaggaattagacattgcattgcagataatccaagaagaaaagctcaaaattaaatat
aagaaccgtttaaaaaagagacttgagcaagctatggttattgataaggaagaggaaaag
atttcgccttatgatgatgatatatttaagcttatagagctactaaaggaagagaagata
aaacaaaataagatgtctttttcagatatattgcaaaatgctaatttattattaggtgag
cataaaatagaaccaaaatggattattattgatgaggttcaagacagcgataaaatacag
cttgattttattgataaactaaaaggtgaaaatactaaattatttgcagttggtgatcca
aatcaggttatttacagctggcgtggaagttctttaaatgtggtttataccttaaagcat
aaatataatgcaaaggagctttcccttccaataaattatcgttcaagtaatgctatttta
gaagcagcaagatgctttcagcaaaatggaagccgcttaatgggagcgagagaaactgaa
aataaaatcatagttaaaaatcattataatccttttaatgaagcatgttatttggtagat
aagattaaggaaatacataaatcaggtgtgccttataaggagattgcaattttttataga
ctgcaaaaccagtctcaggtttttgaagatgtgtttttaaaaaatgatattccttttgaa
gtatctatgaagaaaaccataagtgacagtccagtgttaaattggattattaaattattt
cgtttttgcgtaaatcctaatgatttttcctctgcaatttatgttcttagcaataaggaa
tatggagagaaaatgacagaaaagactgcaagaaaaatagttaaagagcagaacataatt
aaatcagagctactagaaaaaatgcatgaatttttaaataaatgttctgaaattaagata
gcagaagagatttataattattttgaatttgataaatatataaagccaacttcagctaca
tacatagatgataaagaagctatatattctttgcttaatataatcatagagtatgtgaaa
gaaaaacaaatgatatttttagatgggcttagagagttcataaattcatcagcattatat
ggggtaaatattttaaagaaggatataaatagcgatatagattctgttaagcttatgacc
ttgcatgcctctaaaggtttagagttttcttatgtgtttattacaggagttaattatggg
ctaattccacttcatacaagagatatggaggaagaagaggaacaaagattatttttcgtt
ggaattacaagagcaaaagattatctagaactttcttattatacaaatccagattatcat
aaggcagcgcctggagaaagtagatatattcatatgattccagagaaattaatccaaaat
gataaggttaaaaataataatgtaaatcttcaagaacttaaaaaacaaattcaagaggca
aaggctaagggaaagaaagaggaagtttcagttactgaagcagtggaattaccagtagtt
gaagaaataagtgaaacatcaactaaaaaggtaagccacaagaaatacggaacaggaaaa
gtcctaaaagaagatgatatgatgattgaagtagaatttgagaattatggagtaaaagaa
tttgtgaaggcttttagtgagttggagtttttgtag
DBGET
integrated database retrieval system
