Clostridium beijerinckii NCIMB 14988: LF65_05332
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Entry
LF65_05332 CDS
T04773
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03420
Nucleotide excision repair
cbei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF65_05332
03430 Mismatch repair
LF65_05332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_05332
Enzymes [BR:
cbei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF65_05332
DNA repair and recombination proteins [BR:
cbei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF65_05332
MMR (mismatch excision repair)
Other MMR factors
LF65_05332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
DEAD
PhoH
Viral_helicase1
AAA_30
CbiA
AAA_14
nSTAND3
ResIII
zf-C2H2_aberr
NPHP3_N
AAA_18
NACHT
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJH01854
UniProt:
A0A0B5QXZ5
LinkDB
All DBs
Position
complement(5962289..5964463)
Genome browser
AA seq
724 aa
AA seq
DB search
MSKQVDFIREEEKLSEILEILNKEILKYLEKRKNVTNYILEARKKYVEEYKDDEDQIIDY
FDHENYVKEEAYRTIDKRLMEFTKLKEIPYFGKVSFKEGEDIPEDMYVGRYGLTLENSFE
PLIVDWRAPIASLFYKGTLGKSSYNPPSGEIEVDILSRKQLVIKKGQLKGVFDSAIDVKD
EILQMVLTDNSSDKLKDIVMTIQKEQDEIIREDRNKIVVVNGVAGSGKTTIALHRISYLL
YNFRKQFGDKVLIFGPNDVFMDYIAQVLPSLGESNIKQTTFENFAKKEINLKYENIKSFG
SYIEDAMNGKDDTLEEYRYKSSKAFVDLLNSNLEILNREYFKIQPIRFMKEEIVTAKEIE
ELFTNYYKDMPLFRRSEKIKRILISKIKDKRDEEVYKINAEFKEKISSLSEKEIEIEKNN
LEYLKRIKIREIVRAVMKSRDELDTWIKYEPVIDIYKRIINLDIDKDYINELDNLNNEAL
NENKERLSYMDLSGILYLMIKLKGIKVKNEIKHIVIDEAQDYSFIQFEIIKEITGCKSYT
IVGDSNQRLITTSEEPAMLHLDDVFKDLNVEITKYELNKSYRSTQEIMEYSNKFLDKDKI
VPLVRKGEAVIEEEVSNNEEFVDTIISLIEDYEEEGYENIAVIFKDKNELNKFSHVIKEK
INIQSLDNDDIMYKGGKVLLPAYLAKGLEFDGVIIVESEEIEPLVKYIMCTRALHRLSAV
GYLI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaacaagtagattttataagagaagaggaaaagttaagtgaaatcttagaaatt
ctaaataaagaaatcttgaagtatttggaaaaaagaaagaatgtcacaaactatatcctt
gaggctagaaaaaaatacgttgaggaatataaagatgatgaagaccagattatagattat
tttgatcatgaaaattatgtgaaggaagaagcctatagaacaattgacaaaaggcttatg
gaatttacaaagcttaaggaaataccttatttcggaaaagtttcgtttaaagaaggagaa
gacattccagaagatatgtatgtgggtagatatggattgacgctagaaaatagttttgaa
ccattaattgttgattggagagcacctattgcatcacttttttataaaggaactcttggt
aaatcaagttataatccaccttcaggagaaatagaagtagacatattatcaagaaagcaa
cttgtaattaagaaaggtcagttaaagggagtatttgattcagctatagatgttaaagat
gaaatactacaaatggttttaacagataattcatccgataaattaaaagatatagtaatg
actattcaaaaagaacaagatgagattataagagaagatagaaataaaatagttgttgta
aatggggttgctggttcaggaaagacaactatcgcacttcatagaatatcatatttacta
tacaattttagaaaacaatttggagataaggtattaatctttggacctaatgatgttttt
atggattatatagctcaagtactgccttctcttggagaaagtaatattaaacaaacaacc
tttgaaaattttgcgaagaaagaaattaatttaaaatatgaaaatataaagagcttcggt
agctatattgaagatgctatgaacggaaaagatgatactttagaagaatatagatataag
agctctaaggcatttgttgatttattaaattctaatttagaaattttaaatagagaatat
tttaagatacaaccaattagatttatgaaagaagagattgttacagctaaagagatagag
gaactatttacaaattattataaagatatgcctttgtttagaagaagtgagaaaataaaa
agaatattaatatctaaaataaaagataagagagatgaagaagtttataagataaatgct
gagtttaaagaaaaaattagcagcttatcagagaaagaaattgaaatagaaaaaaataat
ctagaatatttaaaaagaatcaagataagagaaattgtaagagcggttatgaaatctcgt
gatgaattagatacttggattaagtacgaaccagtaatagatatttataagagaattatt
aatttagatattgataaggactatattaacgaattagacaatcttaataatgaagcttta
aatgagaataaagaaagactaagttatatggatttatctggaatactttatttaatgatt
aagttaaaagggataaaagtaaaaaatgagataaagcatattgtaattgatgaggcacag
gattatagttttattcaatttgaaataattaaagaaataacaggttgcaagagctataca
attgttggtgattcaaatcagagattaataacaactagcgaagaacctgcaatgcttcac
cttgatgatgtatttaaagatcttaatgtggagattacaaagtatgagttaaataagagt
tacagatcaactcaagagataatggagtattcaaataaattcttggataaagataagatt
gttcctttggttagaaaaggagaagctgtcattgaagaagaagtttccaataatgaggaa
tttgttgatacaataatatcattaattgaagattatgaagaagagggatacgagaatatt
gcagtaatctttaaggataaaaatgaattgaataaattctctcatgttattaaagaaaag
atcaatattcaaagtttagataatgatgatattatgtataagggtggaaaagtacttcta
ccagcttatttggcaaaaggattagaatttgatggagttataatagtagaaagtgaagag
atcgaaccgttagttaaatatataatgtgtactagagcattacacaggttgtctgcagtt
gggtatttaatatag
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