Clostridium beijerinckii NCIMB 14988: LF65_05457
Help
Entry
LF65_05457 CDS
T04773
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03030
DNA replication
cbei03430
Mismatch repair
cbei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF65_05457
03430 Mismatch repair
LF65_05457
03440 Homologous recombination
LF65_05457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbei03032
]
LF65_05457
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_05457
Enzymes [BR:
cbei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF65_05457
DNA replication proteins [BR:
cbei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF65_05457
DNA repair and recombination proteins [BR:
cbei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF65_05457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJH01972
UniProt:
A0A0B5QUR4
LinkDB
All DBs
Position
complement(6116954..6120529)
Genome browser
AA seq
1191 aa
AA seq
DB search
MEEKQFCHLHLHTEYSLLDGSGKIGKLMKKAKELGMKSIAITDHGVLYGLVDFYKAAKEN
DIKPILGCEVYVVPKSRHIKQPDKENSTYHLVLLVKNQIGYENLMKIVSVASIEGFYYKP
RIDYEYLRKHSEGLIALSACLGGEVQSYHLKGNYEKAKETALIYKEIFNGDFYIELQNHG
MEEQKRVNEENIKLSNETGIPLVATNDVHYISKEDSRSHDVLMCIQTAKTIDDPHRRRYP
SDQFYLKSADEMWDMFSYVPEALENTIKIANECSYEYKFHESKLPKFPLEEGQDPYDYLR
DTCYKGLIDRYSVFENLRNQNLDYSKIEEVVANYEEAKEYVDRLEYELQVIKQMGYIDYF
LIVWDFVRFSYESGIPTGPGRGSAAGSIVAYTLGITKIDPIKYSLIFERFLNPERVSMPD
IDSDFCYERRQEVIDYVVEKYGASNVSQIITFGTMAARLCIRDVGRAMNYSYAEVDRIAK
MIPTMLGITIEKALDLNPELKLAYDTDERVKALIDVSKDLEGLPRHSSTHAAGVVIASKP
LVEYVPLQKNEEMIVTQFGMTTLEELGLLKMDFLGLRTLTVMNDAINMIRENRRIDIDLD
KIDFEDKEVYKMIGEGKTAGVFQLESPGMTSFMKELKPDSLEDIIAGISLYRPGPMAEIP
RYIEGKKNSEKVTYLTKELEPILGVTYGCLVYQEQVMQAVRDLAGYSMGRSDMVRRAMSK
KKHKVMEEERKNFIHGIVENDEVIVPGCVRNGISEEIANKIFDSMMDFASYAFNKSHAAA
YAVVGYQTAYLMKYYPVEMIAAMLNSIMGISEKVAYYIGIAEELGIQVLPPNINESFSKF
TVKENKIRFGLAAIKNVGTNVVASIVKAREEKGKFESLVDFINKMDPSSINKRAVECLIK
AGALDDFYVFRSKMLAVHEKLIDNISSDKRRNIDGQISLFASEELKNPEVNYPNIKEFTK
RNLLAMEKEMTGLYITGHPLDDYSQSLKMQTTNEISKIFLVQETLDDSLESDMGEINMFN
RQDALQDNDRVILGGILASVNQKVTRNNSIMAFLKLEDLTGTIEVIVFPKTLEKVKELCV
TDSLVIVKGRLSLKEDEPPKLICESIEPLEKVNTSKVYLRVDDKVAATVLSKKLKELLIK
EYIGDTPIYIFESKGKQKFRVPRDRWISLDSDVMNLLRQTLGDENVKVLDS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacaattttgtcatttacatttgcatacagaatatagtttacttgatgga
tcaggaaaaataggaaagctcatgaagaaggcaaaagaattaggcatgaagagtattgct
attactgatcatggagttttatatgggcttgtagatttctataaggcagcaaaagaaaat
gatataaaacctattttaggatgtgaagtttatgtcgtaccaaagtctagacatataaag
cagccagacaaagagaattcaacttatcatttggttttattagtaaagaatcaaattgga
tatgaaaatctaatgaaaatagtatcagttgcatctattgaaggattttattataagccc
agaatagattatgaatatttaagaaaacatagtgaaggattaattgctttgagtgcatgt
ttaggtggtgaagtacaatcttaccatcttaaaggcaattatgagaaagcaaaagagaca
gccttaatatacaaagaaatttttaacggtgacttttatattgagttacaaaatcatgga
atggaagaacaaaagagagtaaatgaagaaaatataaagttatctaatgaaactggtata
ccactagttgctactaatgatgttcactacataagcaaggaagattctagatcacatgac
gtactaatgtgtatacaaacagctaaaaccattgatgatcctcatagaagaagatatcct
tcagatcagttttatttaaaatcagcagatgaaatgtgggatatgttttcctatgttcct
gaggctttggagaataccattaagatagccaatgagtgtagctatgaatataagtttcac
gaatctaagcttccaaaatttccgctagaagaaggtcaagatccttatgactatcttaga
gatacttgctataaaggtctaatagatagatatagtgtatttgaaaatcttagaaatcag
aatttggattatagtaaaattgaagaagtagtagcaaattatgaagaagctaaagaatat
gttgatagactagaatatgagcttcaagtaataaagcaaatgggatatattgactacttt
ttaattgtatgggattttgttagattttcctatgaaagtggaatacctacagggccaggt
agaggatccgcagcaggttcaatagttgcatatacgttaggaattacaaaaatagatccg
attaagtatagtttaatctttgaacgtttcttaaatccagagagagtatccatgccagat
atagatagtgatttttgttatgaaagaagacaagaagtcattgattatgtagttgagaag
tatggagcaagtaatgtttcgcagataataacgtttggtacaatggcagctagactatgt
atacgagatgttggaagagccatgaattatagttatgcagaggttgatagaatagctaag
atgataccaacaatgcttggaataactatagagaaggcgttagacttaaatccagagctt
aaattagcctatgatacagatgaaagagtaaaggcgttaatagatgtttcgaaggattta
gaggggcttccaaggcattcttctactcatgctgctggtgttgttatagcatcaaagcca
ttagttgaatatgttccattacagaagaatgaagaaatgatagtaacccaatttggaatg
acaacattagaagagcttgggctacttaagatggatttcttaggacttagaacgttaacg
gttatgaatgatgctattaatatgattagagaaaatagaaggatagatattgatttagat
aaaatagattttgaagacaaagaagtatataaaatgataggggaaggtaagactgctgga
gtgttccagcttgaatcgccaggaatgacttcattcatgaaggaattaaaacctgattca
ttggaagatattattgcgggaatatcgctctataggccagggcctatggctgaaattcct
agatacatagaaggaaagaaaaattcagaaaaagttacgtatttaactaaagaattagag
cctatattaggtgttacgtatggatgtttagtatatcaggaacaagtaatgcaggctgtt
agagatttagctggatactccatgggacgtagtgatatggttagaagagctatgtcaaag
aaaaaacataaggtcatggaggaagaaagaaaaaatttcattcatggtattgttgaaaat
gatgaagtaatagtaccaggatgcgtgagaaatggaatttcagaggaaatagctaataaa
attttcgattctatgatggactttgcttcgtatgcatttaataaatcccatgcagcggca
tatgcagttgttggatatcaaacagcatatcttatgaagtactatccagtagagatgatt
gcagcaatgcttaattcaattatgggaatcagtgaaaaggtagcatactatataggtata
gcagaagaacttggtatacaagttttaccacctaatataaacgaaagtttttctaaattc
actgttaaagagaacaagattagatttggattagcagctataaagaatgttggaactaat
gttgtagcaagcatagtgaaggcaagagaagaaaagggtaaatttgaatcgttagttgat
tttataaataaaatggatccatcatcaataaataagcgtgcagttgaatgtttaataaag
gctggggctctagatgatttttatgtttttagatctaagatgttagctgttcatgaaaaa
ttaattgataatatatctagtgataagagaagaaatattgatgggcaaataagcttattt
gcaagtgaagaattaaaaaatccagaagtaaactatcctaatattaaggaatttactaag
cgtaatttattagctatggaaaaggaaatgacggggctttatattactgggcatcctcta
gatgactattctcaaagtctgaaaatgcagacaacaaatgagatttctaaaatattttta
gtacaggaaactttagatgattctctagagagcgatatgggtgaaattaatatgtttaac
aggcaggatgccttacaagataatgatagagtaatccttggaggaatacttgctagtgtt
aatcagaaggtaacaagaaataattctataatggcattcctaaaacttgaagacttaact
ggaacgattgaagtaatagtgttccctaaaactttggagaaagtaaaagaattatgcgtg
acagatagtttggtaatagttaaaggaagattaagtttgaaagaagatgaaccaccaaaa
cttatttgtgaaagtatagaacctttagagaaggtcaatacttcaaaagtatatttaaga
gtcgatgataaggtggcagctactgtcttaagtaaaaaattaaaagaattattgataaag
gaatatattggagatacgcctatttatatatttgagagcaaaggaaaacaaaagtttagg
gtgccaagagatagatggatttccctagatagtgatgttatgaatttattgagacaaact
ttaggagatgagaatgttaaagtattagattcataa
DBGET
integrated database retrieval system
