Clostridium beijerinckii NCIMB 14988: LF65_05497
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Entry
LF65_05497 CDS
T04773
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF65_05497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbei03400
]
LF65_05497
Enzymes [BR:
cbei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LF65_05497
DNA repair and recombination proteins [BR:
cbei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF65_05497
Prokaryotic type
LF65_05497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
AJH02011
UniProt:
A0A0B5QMC5
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All DBs
Position
6164501..6165178
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AA seq
225 aa
AA seq
DB search
MSDILKNDWKNYLQSEFQKDYYINLRKFLINEYNSKTIYPNMYDLFNALHFTPYNKVKVV
ILGQDPYHGPGQAHGLSFSVNPGVKTPPSLINIYKELHTDLGCYIPNNGYLRKWADQGVL
LLNTVLTVRAGEANSHKNKGWEEFTNEVIKVLNKKETPIVFILWGNNAISKTDFITNPKH
IIIKSVHPSPLSASRGFFGSKPFSKTNNFLISTNQEPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatattaaaaaatgattggaaaaattatttgcagtctgaattccaaaaagat
tattatattaatctaagaaaatttttaataaatgaatataactctaagaccatttatcct
aatatgtatgatctctttaacgccttacattttacaccttataataaagttaaagttgtt
atattaggtcaagatccttatcatggacctggccaagcgcatggattgagtttttctgtt
aatccaggtgtaaaaactccaccatctttaattaatatctataaggagctacatactgat
ttaggttgctatattccaaacaatggctatttaagaaagtgggctgatcaaggagtctta
ttgctaaatacggtacttacagttagagctggagaagctaattcccacaaaaataaggga
tgggaagaattcacaaatgaggttattaaggtgctaaataaaaaggaaacacctatagta
ttcatactttggggtaataatgctatttcaaagactgactttattactaatcctaagcat
attataataaaatccgttcatcctagtccattatctgcatcaagaggcttcttcggaagt
aaacctttttcaaaaacaaacaattttctaatttctacaaatcaagaaccaattgactgg
caaatcgaaaatatataa
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