Corynebacterium belfantii: ABMV07_05015
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Entry
ABMV07_05015 CDS
T10842
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cbel Corynebacterium belfantii
Pathway
cbel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABMV07_05015 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbel03400
]
ABMV07_05015 (mfd)
Enzymes [BR:
cbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABMV07_05015 (mfd)
DNA repair and recombination proteins [BR:
cbel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ABMV07_05015 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
RecG_dom3_C
AAA_22
DUF3638
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XGP84286
LinkDB
All DBs
Position
973375..977175
Genome browser
AA seq
1266 aa
AA seq
DB search
MFVPDKSVPAAQPPMLAGLLKVAATDPKIKGLLQHVGEPHLHITGIDQARPWAIAALANR
APVLVVTATGREAEDLSAELRAMLGEKVAWFPAWETLPHERLSPGADIAGQRARILSHIA
DYSVVVTAARGFSQPIVSQVAGRDPLVLEVDSECSLEEATQQLVFRAYHHVDLVAKRGEF
ATRGGILDVFPTTAQHPVRVEFWGDEVSEIRSFQVADQRAIPDSDVSRVEVFPARELPIT
PEIAQRAAELAVKFQGNPTLQELLAKISDSTPSDGMEALIPALVDQPMVTLAELMPENTH
IVVVGPEKIRTRIADLQATDAEFLAAGWEAAAMGADGPVATRGLDLDASSYRSYESLEKT
AQKHTMPWWTFAPPGMFEASDGDTLPLEFEPGPTPRGDLEQIDQMMALLLAHTRDGGAAA
FIAPAQGAIKRMVERFKEQGIPTKVATPGWQPTLGEVTLYQAMSHAGLVFPKVRKQPGKP
ALPLVVITETDLTGNRVGDIAGAKRRPAKRRHRVDPLALKTGDYVVHETHGIGRFLKMTE
RVIQSGDETSRREYIVLEYAASKRGQPADQLYVPMDSLDMLSKYVGGEKPTLSKMGGSDW
KNTKKKARAAVREIAGELVELYAKRQSAPGHAFAPDSPWQHEMEDNFPYVETEDQMLAID
AVKADMEKPSPMDRVVVGDVGYGKTEVAVRAAFKAVQDGRQVVVLVPTTLLAQQHLSTFE
ERMAGFPVTIKGLSRFTSPSESKEILKGLADGSVDIVIGTHRLLQTGVQWKNLGLVIVDE
EQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEDRHPILTYV
GAQEDKQVAAAIRRELLRDGQVFYVHNKVSDIEKKARELRELVPEARIVVAHGQMSEELL
EQTVQGFWDHEYDVLVCTTIVETGLDIANANTLIVENAHHMGLSQLHQLRGRVGRSRERG
YAYFLYPKGATLTENSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAQQSGHIAGV
GFDLYVRLVGEAVEAYRALADGKIVDATEQGPKEIRIDLPVDAHIPEDYINSERLRLEVY
RKLAASANDKDLSLVVEEMKDRFGPVPHEVKRLLAVSRLRHLARATGLSDIGVQGTRIKL
HPVELTDSKQVRLKRLAPSATYRAAAKAIQLPFPKEGAKVTDKQLRDVELLQWVADFIAE
MFEHDRVSVTGEKLPDKVISVAQPMSPAAARAERVAQRAAARRQVRNDDENYEDRREARR
RKYRMR
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcccgataaatccgtgcctgcggcacaaccaccaatgcttgctggtttgctc
aaagttgctgccaccgatccaaagatcaagggactgctccagcatgtaggcgaaccccat
ctgcatatcacaggcattgatcaggcacggccgtgggcgattgctgcgttggcgaaccgt
gccccagtgcttgtggtgacagctacggggcgtgaggcagaggatttatctgctgagctg
cgtgccatgttgggggagaaggtggcgtggtttccggcatgggagacgttgccgcatgaa
cgcttgagcccaggtgctgatattgctggtcagcgagcacgtatcttgtcgcatattgca
gactattcagtggtggtgacggctgcgcgtggcttcagccagccgattgtttcacaggtt
gctggtcgagatcctttggtgttggaagttgattccgaatgcagtttggaagaagcaaca
cagcagttggtgtttcgggcttatcaccatgtggatttggtggctaagcgtggtgaattt
gcaacgcgcggcggcattttggatgtgtttcccacaacggctcagcatccagtacgtgtg
gagttttggggcgatgaggtttcagagatccgtagtttccaagttgctgatcagcgtgcg
attcctgattcggatgtgtcgcgtgtagaggttttcccagcgagagaactgcctattacc
ccagaaattgcacaacgtgcagctgagctcgctgtgaagtttcaaggaaacccaacgctg
caggagctactggctaaaatttccgactctaccccgtcagatggcatggaagccttgatc
ccagcgctggttgatcaacccatggtcacccttgcggagctcatgcccgaaaacacccat
attgtggtggttgggccggaaaagattcggactcgtatagcagatcttcaagctacggat
gccgagtttttggccgctggttgggaggctgctgctatgggcgccgatggtcccgtggca
acgcgtggcctcgatcttgatgccagctcgtatcgctcttatgaatcgctggaaaagaca
gcacagaagcacaccatgccatggtggacttttgcgccacctggcatgtttgaagcctca
gacggcgacaccctccctttggaatttgagccgggacctacaccgcgtggcgatctcgaa
cagattgatcagatgatggctctgcttcttgcacatacgcgcgacggcggtgcggcagcc
tttattgctcctgctcaaggcgctattaagcgcatggtggaacgctttaaggaacaagga
atccccacgaaggtggcaacacctggctggcagccaaccttgggcgaagtgacactgtat
caggcgatgagccatgcaggtttggtatttcccaaggtgcgaaagcaacctgggaagcct
gcattgccactggtagtgatcacagaaactgaccttaccggtaaccgagttggtgacatt
gctggtgcgaagcgtcgcccagccaagcgccgccaccgagtggacccgcttgctttgaaa
accggcgactatgtggtccatgaaacccatggcatcggccggttcctcaagatgaccgag
cgtgtgattcagtccggtgatgagacttcgcggcgcgaatacatcgtgttggaatacgcg
gcgtcgaaacgcgggcagccagcagatcaactgtatgtgcctatggattccctcgacatg
ctgagtaaatatgtcggcggtgaaaaacctaccctttctaaaatgggtggctcggactgg
aagaacaccaaaaagaaagctcgcgcagcggtgcgcgaaatcgctggtgaattagtcgag
ctgtatgccaagcggcaatccgcgccggggcatgcgtttgcacctgattccccgtggcaa
cacgagatggaagataacttcccttacgtggaaaccgaagatcagatgcttgctattgac
gcggtgaaagcggacatggaaaagccttcgccaatggaccgcgtggtggtcggtgacgta
ggttatggcaaaactgaagttgctgtgcgtgcggcattcaaggcggtgcaagatggtcgt
caagtcgtggtgcttgttcctacaaccttgttggcccagcagcatttgagcacctttgaa
gaacgcatggcaggattccccgtgacgatcaaggggcttagccgttttacctctcctagt
gaatcaaaggagatccttaaaggacttgccgacggttctgttgacatcgtgatcggtacg
caccgcttgctgcaaacaggtgtgcagtggaaaaatctgggccttgtcatcgtggacgag
gaacagcgttttggcgttgagcacaaggaacacatcaaggcattgcgtacccatgtggac
gtgctcacgatgtcggcaactccgatcccgcgcaccttggagatgtcgatggccggtatc
cgtgagatgtcgaccattttgaccccgccagaagatcgacacccgattttgacctacgtg
ggcgcccaagaagataaacaagtagcggcagccattaggcgtgagctgcttcgtgatggc
caagttttctatgtgcataataaagtctccgacatcgagaaaaaggctcgggaactgcgt
gaactcgtaccggaagcacgcattgtggtggcccatgggcaaatgagcgaagagctacta
gaacaaactgttcagggattctgggaccatgaatacgatgttctggtctgtaccacgatt
gttgaaaccggcctagacatcgcgaatgccaacacgcttatcgtggaaaacgctcaccac
atgggtctgtcgcagctgcaccagttgcgtgggcgagtagggcgatcccgtgaacggggt
tacgcttatttcttgtatcccaagggtgccacgttgacggaaaactcctatgatcgtctt
gctacgatcgcgcaaaacaacgatcttggtgctggtatggcggtggccatgaaagacttg
gaaatgcgcggtgccggcaatgtgttgggagcgcaacagtctggtcatatcgccggagtg
ggctttgacctgtatgttcgtttggtgggagaagcagtcgaggcataccgtgcgctagca
gatggcaagattgtcgatgccacagagcaggggccgaaggagatccgcatcgatttgcct
gtcgacgcacacatccccgaggactacattaactcagaacgattgcgccttgaggtctat
cgtaaacttgccgcctcggccaatgataaggacttgtcgcttgtggttgaggaaatgaaa
gaccgcttcggtcccgttccccacgaggtaaagcgactgctggcggtgtcgcgcctgcgt
cacctagcacgcgcgacagggctaagcgatattggtgtgcagggcacacgcatcaagctg
cacccagtggaattgactgattccaagcaggtgcgtctcaagcgtctggcaccttctgct
acatatcgcgctgctgctaaggccatccagttgccatttcctaaagaaggcgcgaaggta
acggacaaacagcttcgcgatgttgaattattgcagtgggttgctgactttatcgcggag
atgtttgaacacgatcgcgtatctgtgacgggggagaagctgccggataaagtgatctcg
gtggcgcagcccatgagccctgctgcggcgcgtgcggagcgcgtagcgcaacgggcagcg
gcgcgcagacaagtgcgaaatgacgatgagaactacgaagatcgtagagaagcgcgacgt
agaaaataccgtatgcgttaa
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integrated database retrieval system
