Corynebacterium belfantii: ABMV07_05560
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Entry
ABMV07_05560 CDS
T10842
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbel Corynebacterium belfantii
Pathway
cbel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABMV07_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbel03019
]
ABMV07_05560
03009 Ribosome biogenesis [BR:
cbel03009
]
ABMV07_05560
Enzymes [BR:
cbel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABMV07_05560
Messenger RNA biogenesis [BR:
cbel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABMV07_05560
Ribosome biogenesis [BR:
cbel03009
]
Prokaryotic type
rRNA helicases
ABMV07_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
XGP84382
LinkDB
All DBs
Position
1084919..1086937
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AA seq
672 aa
AA seq
DB search
MSITDNATSGENELDIKILSESQDNSQVDEGTTINNDVVADVDDSRVANTSEATDSAQQE
ADSAEKDGFEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMQGYDVMGLAQTGTGKTAA
FALPILSRIDVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQL
SGLRRGAQIIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPE
DKQVALFSATMPNGIRRLSRDYMKDPHEIQVKSQTRTNTNITQRYLNVAHRNKLDALTRI
LEVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDIL
VATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRS
IERATNAKLIEMDLPTVDEVNESRKAKFADSITESLEDDQVAIFRSLIKSYAEEHDVPLE
DIAAALATQARAGSEFLMKEPPPEKHRERRDRDDRRGGRDRFDRDDRRGGRDRGSRFERN
DDMQLYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRINIFVDHTLVELPKNMDPSVID
RLSDTRISGQLIHIEKDNGRPPRRNDGYRGGDRFDRDDRRGGRDRGGYRGGRDRNDRGDR
GGYRGGRGGYRD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccagcggcgagaacgagctggatattaagattttgtcg
gaatctcaggataattcgcaggtagacgaaggcaccaccatcaataatgatgtcgttgcc
gatgtagacgactccagggttgcgaacacttctgaggccaccgactccgctcagcaagaa
gcggacagtgcagaaaaagatggattcgaggctcttggtctcccagacgcaatcctgaag
gcagtcgctaaggttggcttcgaaacgccatccccaattcaggcgcagaccattccggtg
ttgatgcaggggtatgacgttatgggcctcgcgcagacgggtacaggtaagacggcagct
ttcgcgttgccaatcttgtcgcgtattgacgtcaagaagcgccacccacaggcgttgatc
ctcgccccaactcgcgaacttgctttgcaggttgcagactccttccagtccttcgcagac
cacttgggcgacatccacgtgctaccaatctatggcggtcaggcttacggcattcagctg
tctggcctgcgccgtggcgcacagatcatcgtgggtactccaggtcgtgtgatcgaccac
ttggagaagggctccctcgacatttccaacctccgcttcctcgttctggacgaggcagac
gagatgctcaacatgggcttccaggaagacgttgagcgcattttggaggacaccccagag
gacaagcaggttgctttgttctctgccaccatgccaaacggcattcgtcgtttgtctcgc
gactacatgaaggatcctcatgagatccaggtgaagtcgcagacgcgcaccaacacgaac
atcactcagcgttacctcaacgttgcacaccgcaacaagctcgatgccttgacccgtatc
cttgaggtcaccgagttcgaagccatgatcatgttcgtgcgtaccaagcatgaaactgaa
gaagtcgctgaaaagcttcgcgcacgcggattctccgctgccgctatcaacggcgacatc
gctcaggctcagcgtgagcgcaccgtcgaccagctcaaggacggtcgcctcgacatcctc
gttgctaccgacgttgctgcccgtggcctcgacgttgaacgcatcactcacgtgttcaac
tacgacattccaaacgacacagaatcctacgtccaccgcattggtcgtaccggtcgtgca
ggtcgttctggtgaagcaatcttgttcgttaccccacgtgagcgtcgcatgttgcgttcc
atcgagcgcgccaccaacgcaaagctgatcgaaatggatctgcctaccgttgatgaggtc
aatgagtcccgcaaggcaaagtttgctgactccatcaccgagtctcttgaagacgatcag
gtagcaatcttccgtagcctgattaagtcctacgcggaagagcacgatgttccactagaa
gacatcgccgccgcattggctacccaggcacgcgctggttccgaattcttgatgaaggag
ccaccaccagagaagcaccgtgagcgtcgtgaccgcgacgatcgtcgtggcggacgcgac
cgcttcgatcgcgatgaccgccgtggcggccgtgaccgtggctcccgcttcgagcgtaac
gacgacatgcagctctaccgcctagcagttggtaagcgccagcatgttcgccctggtgcc
atcgttggtgctctggcaaacgaaggtggcctgtccaacaaggacttcggccgcatcaac
atcttcgttgatcacaccttggtcgagttgccaaagaacatggatccaagcgtgatcgac
cgcctcagcgatactcgtatctccggccaattgatccacatcgaaaaagacaacggccga
ccaccacgtcgtaacgacggataccgtggcggcgaccgcttcgatcgtgacgatcgtcgt
ggcggacgtgaccgcggcggataccgtggcggacgtgaccgcaacgaccgtggtgatcgc
ggtggctaccgtggtggccgcggcggataccgcgactaa
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