Chryseobacterium bernardetii: EG339_03055
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Entry
EG339_03055 CDS
T06826
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cben
Chryseobacterium bernardetii
Pathway
cben03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EG339_03055 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_03055 (ruvB)
Enzymes [BR:
cben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG339_03055 (ruvB)
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EG339_03055 (ruvB)
RecFOR pathway proteins
EG339_03055 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_16
AAA_3
Mg_chelatase
TIP49
AAA_14
Rad17
TsaE
nSTAND3
Sigma54_activ_2
RNA_helicase
NB-ARC
NTPase_1
AAA_PrkA
AAA_18
AAA_28
NPHP3_N
AAA_33
AAA_24
NACHT
Bac_DnaA
ABC_tran
AAA_17
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AZB23671
UniProt:
A0A3G6T2G9
LinkDB
All DBs
Position
612560..613582
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AA seq
340 aa
AA seq
DB search
MPDFLHPDKENYSREELMQEEQIRPQSFKDFAGQRKTLENLEVFVTAAKRRGGALDHVLL
HGPPGLGKTTLANIIANELGVNCKITSGPVLDKPGSLAGLLTNLEENDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMLETGPNARSVQIGLNPFTLVGATTRSGMLTKPMLARFGIQSR
LEYYSIELLSTIIQRSARVLGVAIYEDASIEIARRSRGTPRIANALLRRVRDFAEIKGNG
EIEIKITKYALDSLNVDEFGLDEMDNKIMRVMIENFKGKPVGISALATSIGENPETLEEV
YEPFLIQEGFIIRTPRGREVTDKAYQHLNISRPKNPGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccagattttttacatccagataaggaaaactactcacgagaggagttgatgcaggaa
gaacagattcgtccccaaagctttaaggattttgcgggacagagaaagacgctggaaaat
cttgaggtttttgtgacggctgccaaacgacgtggcggagcccttgaccatgttcttttg
catggccctccaggtttgggaaaaaccactttagccaacattattgccaatgagcttggg
gtgaactgtaagattacttcaggccctgtattggataagccgggaagtttagccgggttg
cttactaatctggaagaaaatgatgttcttttcattgatgagattcaccgcctttctcct
gttgtagaagaatacctctattcagcaatggaagattacaagattgatatcatgctggaa
acaggacctaacgcaagaagtgtacaaatcgggctgaatccttttacactggttggcgca
accaccagaagcggaatgcttacaaagccgatgcttgcaagatttggtatccaaagcaga
ctggagtactactctattgaacttttatcaacaattatccaaaggagtgcaagggttcta
ggtgtggcaatctatgaagatgcttctattgaaattgccagaagaagccgtggaaccccg
agaatagccaatgctttactaagaagggttcgtgattttgctgaaataaaaggaaatggt
gaaattgagatcaagattaccaaatatgctttggattccctcaatgtagatgagtttgga
ctggatgaaatggataataagatcatgcgtgtcatgattgaaaattttaaaggaaagccc
gtaggaatttccgcattggcaacttctattggagaaaacccggaaactctggaagaggta
tatgaaccgtttttgattcaggaaggattcattatcaggactccaaggggcagggaggtt
accgataaggcttaccagcatttaaatatttcaagacccaaaaatccgggagagttattt
taa
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