Chryseobacterium bernardetii: EG339_03915
Help
Entry
EG339_03915 CDS
T06826
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cben
Chryseobacterium bernardetii
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cben03032
]
EG339_03915 (topA)
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_03915 (topA)
Enzymes [BR:
cben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG339_03915 (topA)
DNA replication proteins [BR:
cben03032
]
Prokaryotic type
DNA Topoisomerases
EG339_03915 (topA)
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG339_03915 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
YqfQ
Motif
Other DBs
NCBI-ProteinID:
AZB23817
UniProt:
A0A3G6T7I7
LinkDB
All DBs
Position
complement(813010..815571)
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKADMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFVPKASFKLDGIFLNNTEQEIAAKLKKDFGKEAEAEKFLEQAKTTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGFITYMRTDSVNLSQEAIEGAK
KQIISEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFGVKSIGDAQLNKLYQLIYRRTLAS
QMANAKIEKTVIEIGNTSLPHHFEAQGEVIIFDGFLKAYGIVKTEDDDEENNEKLLPKVK
VGEVLSYKSITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPHTREVIKMSLVKDKIKKSVLEEKFGGDKNKFVPTDIGEVVNDFLTDNFREILDYGFT
ARVEESFDEIASGDQKWKEMMTNFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPIFASLMAGQNIATITFEEALELFKLPFELNDYEGHAVSVG
VGRFGPYVKWGETFISIPKGEDPLSVDQNRAEEIINEKKRADAPIATYKGEPVTKGTGRF
GPFIKYKDIFVNVPKKYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISLENGRWGP
FIKFGKAMFKIPKKSDDTKYDAEELKEISLEEVKKWITDQDKNAFAEKKKPAAKKAATTK
KTTAAKKPAAKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggcaaaggcaaaaactattcagaaatat
ttaggtaaggattttgaagtaaaatccagtttcggtcatatccgggatctgcctaaaaaa
ggaatgggaatagatcttgccacctttagtcctgattacgaagtttctgcagacaagaag
aaattggttacagaattaaaggccgcggtaaagaaagcagacatggtttggctggcttcc
gatgaagaccgcgagggagaagccattgcatggcacttagcagatgaattgaaactgaag
cctgaaaacagaaaaagaattgttttccacgagattactaaaaatgccattctaaaagca
attgaaaatccaagggatattgatcagaatttagtaaatgcccagcaggcaagaagggtg
ctggacagaattgtaggttttgaaatgtcaccggttttatggaaaaaagtaaaaccaggg
ctttccgcaggaagagtgcagtcggtagccgtaaggttaattgttgaaagagaaaaggaa
atccgtgagtttgtgcctaaagcaagttttaaactggacggaattttcttaaacaataca
gaacaggaaattgctgccaaacttaaaaaagacttcgggaaagaagctgaagcagaaaaa
ttccttgaacaggcaaaaactacagaatttaaagttctgaatgttgaaaccaagcctgga
acacgttctgcatctgcaccttttaccacttccacactacagcaggaagcttcttcaaga
ttaggttataatgtaaccaataccatgcgtctggcacagagactgtatgaggaaggattc
attacgtacatgagaacagattccgtaaacctttctcaggaagccattgaaggagccaaa
aaacagattatctcagaatacggagcagaatactcttctccgagaaattatacaacaaaa
tcagcttctgcccaggaagcgcacgaagccatccgtcctacagatttcggagtgaagagc
attggagatgcacagctgaataagctgtatcagctgatctacagaagaacattagcttcc
cagatggcgaatgctaaaattgaaaaaacagtaattgagatcggaaatacttcattacca
catcattttgaagctcagggggaagtaatcatctttgatggtttccttaaagcttacggg
attgtaaagactgaagacgatgatgaggaaaacaatgaaaaactattaccaaaagtaaaa
gttggcgaagtactaagctataaatccattacggcaacagaaaaatttacaaggccaagt
gcaagatatactgaagccggattggttagaaaacttgaagaattagggattggaagaccg
tctacttatgcgcccactattcagaccatccagaacagagaatatgtggataaaagagag
attgaaccacatacccgtgaagtaatcaaaatgtctttggtaaaagataaaatcaaaaaa
tcagttctggaagagaaattcggtggagataaaaataagttcgttcctacagacatagga
gaagttgtgaatgatttcttaacagataatttcagagaaatccttgattatggctttacg
gcaagagtagaagaaagcttcgacgaaattgcaagcggagaccagaaatggaaagaaatg
atgacaaacttctattctaaattccatccaagaattgaagatgtagaagaaaatgcagac
cgtgcaacaggagacagacttttaggggttgatccgaagaccggtaaaaatgttcatgcc
agaatcggaaggtttggagccatgatccagatcggagaaacagatgatgaagaaaaacca
atcttcgcgtcattaatggcaggccagaatattgcaaccattacctttgaagaagcattg
gagctgttcaaattaccttttgagctaaatgattatgaagggcatgccgtttccgttgga
gtaggaaggttcgggccttatgtaaagtggggagaaactttcatcagcattccgaaagga
gaagatccgctttctgtagatcaaaaccgtgcggaagagatcattaacgagaagaaaaga
gcggatgctccgattgctacatacaaaggagaacctgtaaccaaaggaaccggaagattc
gggccgttcattaaatacaaagatattttcgtgaatgttccgaagaaatataactttgat
aatctttcccaaagtgatatcaatgaactgattgatgccaagcttgaaaaagaagccaac
cgatatatccagcaatgggaaaaagaaaagatttctcttgaaaacggtagatggggacct
ttcatcaaatttggaaaagccatgttcaaaattccaaagaaaagtgatgataccaagtac
gatgcagaagaattgaaagaaatttccctggaagaagtaaagaaatggatcacagatcag
gataaaaatgcctttgcagaaaagaaaaaacctgcagcaaaaaaggcagcaactactaag
aaaactacagctgctaaaaagccggcagctaagaagaaataa
DBGET
integrated database retrieval system
