Chryseobacterium bernardetii: EG339_04775
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Entry
EG339_04775 CDS
T06826
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cben
Chryseobacterium bernardetii
Pathway
cben03030
DNA replication
cben03430
Mismatch repair
cben03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EG339_04775
03430 Mismatch repair
EG339_04775
03440 Homologous recombination
EG339_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cben03032
]
EG339_04775
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_04775
Enzymes [BR:
cben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EG339_04775
DNA replication proteins [BR:
cben03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EG339_04775
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EG339_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
TraI_2_C
BBP1_C
Motif
Other DBs
NCBI-ProteinID:
AZB23982
UniProt:
A0A3G6T3P1
LinkDB
All DBs
Position
complement(1007958..1009181)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSIIDIESNGAGYRHECIIDIAIYRYDGQKITDQFISLVNPEGEITPFVQKLTSITPKM
VKTAPKFHEIAKRVIEITQNTTLVGHNIDFDYRMLRQSFKRLGYDFKINTLDTIPLAKKL
IPDEVSYSLGKLVKSLGIPLTNHHRADGDARATLELFKLLISKDTENEIIQKQHEETNAK
TYINKIKELTQDLPNDKGFVYFQDEAGRIIFSDYVQDINKFSKKVFNSKSKKWEQVQKDS
EQINFELTGTDIIAKLILNSKNVKKKEILPFGLYFRNNKYIVEKNKLNKTEKPILKFRSF
TQGTKAVQFIETHEEYSEVAILKQKIEFRKKNELWLGTGRKLGEKLFLIIENGKVISFGF
YELFTQIQTLSKLAKLKIDLQLSSTDLNNELQLALLRGDFETLPLPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaattatagacatagaaagtaatggtgcaggttatagacatgaatgcattata
gatattgccatttacagatacgatgggcagaaaatcacagaccagttcatatcccttgtc
aacccggaaggagaaattactccttttgttcaaaagcttaccagtattacacccaaaatg
gtgaaaacggccccgaaatttcatgaaatagctaaaagagttattgaaattacccaaaat
acaacattagtaggacataatattgattttgattacaggatgcttcgtcaatcatttaaa
aggctgggttacgattttaaaatcaatactttagatactattcctttagctaaaaaattg
attcctgatgaagtaagctattcgttgggcaaactggtaaaatcattgggaattccttta
accaatcaccacagggcagacggagatgcaagagcaactttggagcttttcaagctttta
atatcaaaagacactgagaatgagatcatccaaaaacagcatgaggaaactaatgcaaaa
acctatatcaataagataaaagaacttactcaggatcttcccaatgataaagggtttgtc
tattttcaggatgaggctggcagaattatcttctcagattatgttcaggatatcaataaa
ttttcaaaaaaggtattcaactccaagtccaaaaaatgggaacaggttcaaaaagattca
gaacagatcaactttgagcttaccggaacggatattattgccaaactgatcctgaattct
aaaaatgtgaagaaaaaagagattctgcctttcgggctttatttcagaaacaataaatat
attgttgaaaagaataagctcaataaaacagaaaagccaatccttaaattccgatcattc
acccagggaacaaaagcagttcagttcattgaaactcatgaagaatacagtgaagtagcc
atattgaagcagaaaatagagttcagaaaaaagaatgagctttggctcggtacaggaaga
aaattaggtgaaaaattatttttaattattgaaaacggaaaagtaatctctttcggcttt
tatgaactgtttacgcagatacaaacattaagtaaacttgccaaattaaaaatagatctc
cagttgtcttcaacggacctgaataatgaattacagttagcacttctgcgtggagatttt
gaaacgttgccgctacctaaataa
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