Chryseobacterium bernardetii: EG339_07975
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Entry
EG339_07975 CDS
T06826
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cben
Chryseobacterium bernardetii
Pathway
cben03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EG339_07975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cben03021
]
EG339_07975
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_07975
Enzymes [BR:
cben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EG339_07975
Transcription machinery [BR:
cben03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EG339_07975
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EG339_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
LmeA
Motif
Other DBs
NCBI-ProteinID:
AZB24548
UniProt:
A0A3G6T5T5
LinkDB
All DBs
Position
1707809..1708804
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKASAEGQANEQVVAKVSGQTIITAGDLGKSIN
GFEVLNPDLVICNLNTDVTFEITFNIEKGRGYVPSEQNKSNNAPVGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattttacttaactctgatgaattt
aaaggtcaatttgaattcagacctttagaaccaggtttcgggcttacaatcggtaatgct
ttgagaagagtgttgctttcttctctggaaggatacgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaactattccaggagtaatcgaagacgttaccgaaattatt
cttaacctaaagcaggtaagattaaaagcttcagcagaaggccaggctaatgagcaggtt
gttgctaaagtttcaggtcaaacgattattactgctggtgatttaggaaaatcgatcaac
ggattcgaggtattaaacccggatttagtgatttgtaacctaaatactgatgtaactttc
gaaattactttcaatattgaaaaaggtagaggatatgttccttcagaacaaaataagtcg
aacaatgcacctgttggtactattgctattgactctattttcacgccgatcaagaaagta
caatacagcattgaaaattatcgtgtagagcaaaaaacagactacgaaaaacttgtatta
gatatagaaactgatgggtctatcagccctcagaatgctttaacagaagcttctaagata
ttaatttatcacttcatgctattctctgatgagagaatcactcttgaaactgaagctgta
aaagcatctatccaatatgatgaggaaactcttcatacaagacaattacttaagtctaaa
ttagcagatatggatctttctgtaagagcccttaactgtcttaaagcagctgaagtagaa
actcttggagaattggtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataagttagacgctgataaataa
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