Chryseobacterium bernardetii: EG339_09000
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Entry
EG339_09000 CDS
T06826
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cben
Chryseobacterium bernardetii
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_09000
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EG339_09000
Archaeal homologous recombinant proteins
EG339_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
DUF2721
Motif
Other DBs
NCBI-ProteinID:
AZB24718
UniProt:
A0A3G6T6A5
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All DBs
Position
complement(1940167..1943202)
Genome browser
AA seq
1011 aa
AA seq
DB search
MIPIQLTVEGLYSYRERQTIDFRNLTEAGLFGIFGAVGSGKSSVLEAISFALYGETERLN
MRDKRAYNMMNLKSNTSYIEFDFINYENKLFRATRDFRRNSKKFEDVKPYSVVFYENIDG
KWIPLDHSNAEQIIGLSYSNFKRTIIIPQGQFKEFLELGAADRTNMMKEIFSLQRYDLQN
NVSVLNARNRSELDQLEGQLKGFEEINEEKIQLQKNLLEEEQKKLAQANEKFEKVSQVYQ
QLKNLKTDFESLKQNREKFNTLSEQKPQMDALEAQSELYERTFRTFNPLITEKKRLSKSV
VEKGNEKERQIKAVQETETVFNHIKEQLAVLEPKFKALDQSRIQENDLNFIVQILKFYKE
IETLNERTQKGSEKVAEVEAQREIIQKKITELSKNIEVLKSQKLDASLLSDVGNWFIQQK
NFKKSQQEQLEKTQKHQKQIELIAEELQPFALQENFKADFTNKKEALEAQKKELSQKLDH
LKIQKELSRFASELHDGEACPLCGSQEHPHIVEFHDVNTELQDIQEKIKAIEQEAHQLQQ
QETAVEKILDRKKIFEEQLISEQKVLQQIQKDLDSHVQQFTWKQFFPDQEEDFEKKRSDS
FAVEKKIEETDKMISLERENLDKESKVLDKYKNALEMFKLEEATKQKEINISRSNLKILM
WEPYAQKSVEEIEEAYQKLAQSNAETEQLYQKASQQEKDLAPKLAEQKAIVSQTEKQIAV
LEKEISENQQTIDKALKEHNFTVFNEVENILLQEINIQEIRAKIQQFRINFETLKKVIEG
LELKLKNLSFDDEQFSMAEKQFEEAHTELKQINDAVVTMNAERERLEKEYRKKEDLLKEL
TKLQKRSENLKLMMNLFKGAGFVQYVSSIYLRQLCDHANIRFHKMTRNQLSLQLNENNDF
EIIDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQSNAQADKNFFFIDEGFGTQDTE
SVNIVFETLTNLMKENRIVGIISHVEELKEKIPTALNIIKDEERGSLIQII
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatccctattcagttaaccgttgaaggtttatattcttaccgggaacgtcagaccata
gatttcagaaatcttacggaggcgggcttatttggtatttttggagcggtgggttccgga
aaatcctcagtgcttgaagccatttcgtttgctttatacggcgaaacggaacggcttaat
atgcgtgacaaaagagcctataacatgatgaatttaaaatcaaacacttcctatattgaa
tttgattttattaattatgaaaataaactgttccgggctaccagagatttcagacggaat
tctaaaaaatttgaagatgtaaaaccttattccgtagtgttctatgagaatattgacggg
aaatggattcctttggatcattctaatgcagaacagattattggtttaagttattccaat
tttaaaagaacgatcattatccctcaggggcagtttaaagagtttcttgaattaggggct
gcggacagaaccaacatgatgaaggagatcttcagccttcagcgttatgacctgcaaaat
aatgtttcagttttaaatgccagaaacagatctgaactggatcagcttgagggacagttg
aaaggttttgaggagattaatgaagaaaaaattcagttacagaaaaaccttttggaagag
gaacagaaaaagcttgcccaggctaatgaaaagtttgaaaaggtttcccaggtttatcaa
cagttgaaaaatttaaaaacagattttgaaagtttaaaacaaaaccgggaaaaattcaat
accctttctgaacaaaagccacagatggatgctttagaagctcaatctgaattatatgaa
cgtactttcaggacttttaatccattaattactgaaaaaaaaaggctttccaaaagtgtc
gttgaaaaagggaatgagaaagaaaggcagatcaaagctgtacaggaaacggaaactgtt
tttaatcatataaaggagcagcttgctgttttggaacccaagtttaaggcattggatcag
tccaggatacaggaaaacgatctaaattttattgtacagatcctgaagttttacaaggag
attgaaacgcttaacgaaagaactcaaaaaggttcagaaaaggtagcagaagtagaagct
caaagggaaatcattcaaaagaagattactgaactttctaaaaatattgaggttttaaaa
agtcaaaagcttgacgcttctttactatccgatgtgggaaattggtttattcaacagaag
aacttcaaaaaatcacagcaggaacaacttgaaaaaactcaaaagcatcagaaacagatt
gaattgattgctgaagagttacaaccttttgctctccaggaaaactttaaagctgatttc
acaaataaaaaagaagctctcgaagctcaaaaaaaagaactttcccaaaagctggaccat
ctgaaaattcagaaagaactttcccgttttgccagtgaactccatgatggtgaagcctgt
ccgctttgtggatctcaggaacatccgcatattgtggaatttcatgacgtaaatacagaa
ctgcaggatattcaggagaaaattaaagcaattgaacaggaagcccaccagcttcagcaa
caggaaactgctgttgagaaaattctggacagaaagaaaatctttgaagaacagctgatc
tctgaacagaaggtccttcaacaaattcaaaaggatttggacagccacgttcaacaattt
acatggaaacaattctttccggatcaggaggaggattttgagaaaaaaagatcggattct
tttgctgtggagaaaaagattgaagaaacggacaaaatgatcagcctggaacgtgaaaac
ctggacaaggaaagtaaggtgctggacaaatataaaaatgctttggaaatgttcaagctg
gaagaggctacaaagcagaaagagatcaatatcagccgttccaaccttaaaattctgatg
tgggagccttatgcacaaaagtccgtagaggaaattgaagaggcttatcagaaattagca
caatccaatgcagaaacggagcaactgtatcaaaaagcttctcaacaggaaaaagatctt
gctcctaagcttgcagaacagaaagcaattgtaagtcagacagaaaaacagattgcagta
cttgaaaaagaaatttcagaaaaccagcagactattgataaggctttaaaagagcataat
tttacggtctttaatgaagtcgaaaatatcctgctacaggaaatcaatatacaggaaatc
cgggctaaaatccagcaattcagaattaattttgaaaccctgaagaaagtaattgaagga
ctggaattaaaacttaaaaatctttcctttgatgatgaacagttttcaatggctgaaaaa
cagtttgaagaagctcatactgaattaaagcaaatcaacgatgccgttgtcaccatgaat
gccgaaagagaaaggttagaaaaagaatacaggaaaaaagaagaccttctgaaggagtta
accaagcttcagaaacgttccgaaaacctgaaattaatgatgaatctgtttaaaggtgcc
ggtttcgtacaatatgtttcttctatttatctgaggcagctatgcgatcatgccaatatc
cgcttccataaaatgaccagaaaccaattgagcttacaattgaatgaaaataatgatttt
gaaatcattgattatcttaacgaaggcagaagcagaagtgtgaaaaccttgtcgggcggg
caggcattccaggtatctttaagtctggctttggccctggcagaaagtgtacagtccaat
gctcaggcggataaaaacttcttctttattgatgagggcttcgggacccaggatacggaa
tctgtaaatattgtatttgaaacactgactaacctgatgaaggaaaacagaattgtagga
attatttcccatgtagaagagcttaaagaaaagattcctacggcacttaacattattaaa
gatgaggaaagaggaagcttaattcagatcatttaa
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