Chryseobacterium bernardetii: EG339_09005
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Entry
EG339_09005 CDS
T06826
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cben
Chryseobacterium bernardetii
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_09005 (sbcD)
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EG339_09005 (sbcD)
Archaeal homologous recombinant proteins
EG339_09005 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AZB24719
UniProt:
A0A3G6TA00
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Position
complement(1943206..1944411)
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AA seq
401 aa
AA seq
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MKILHTADWHLGKKLDRFSRLEEQVSAMEEIITIADEEKADLVLIAGDLFDNFNPAVEAV
ELFYKTLKRLSLNGKRPVIAISGNHDSPNLINAPDPLARECGIILIGHPKAEIIPFATDH
FKILNSKEGFIEMKISSVDFPVRLLHTPYANEIRLKEYLGENKEEEINNVLSRTWKELAD
LFCDENGVNLLTAHLYMNKRGAEILEEPEGEKPIKIGNADLIYSDSIPEQIQYTALGHLH
GFQNIGTKDKPVIYSSSPLCYSFSEAGQKKYVSIIEAEPGKPVSYEKKALKSGRALVRKT
FTSVEETIQWLKDNPNTFIELTLESETFLTADERRLIYQSHTGIVYLIPKFKTSGSGEEI
SHEINLNQDIETLFKDYFKSKNGGQEANEELMKLFNEILNT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttacacaccgccgactggcatttaggaaaaaaactggaccgcttttcacga
ctggaagagcaggtttcagcaatggaagaaattatcacgattgctgatgaggaaaaggca
gatcttgttcttattgccggtgatctctttgataattttaaccctgctgtagaagccgtt
gagcttttttataaaaccttaaaacgtttatctttaaacggaaaacgccctgtaattgct
atttccgggaatcatgattctcctaatctaatcaatgcaccggatcctttagccagagaa
tgcggaattattttaataggacacccaaaagcagaaattattccttttgcaacagatcac
tttaaaattttaaattcaaaagaaggctttatagaaatgaagatcagcagtgttgatttt
cctgtaagactattgcatactccttatgccaatgaaatccgtctgaaggaatatttaggc
gagaataaagaggaagagatcaataatgtcctttccagaacgtggaaagaacttgcagac
ctgttctgtgatgaaaacggagtcaacctgctgactgctcatttgtatatgaataaaaga
ggtgctgagatcctggaagaacctgaaggagaaaaacccatcaaaatcggaaatgctgat
cttatttattctgatagtattccggaacagattcagtatacggctttgggtcacttacat
ggctttcagaatatcggaacaaaggataagccggttatttattcctcttctcccctatgc
tatagctttagtgaggctgggcagaaaaaatatgtttcgattattgaagctgaacctggt
aaacccgtttcttatgaaaaaaaggcattgaagagcggaagggctttagtaagaaaaacc
tttacatccgtagaagaaaccattcagtggctgaaggacaatcccaatacatttattgaa
ctgacattagaaagtgaaacttttttaacggctgatgagcgcagattgatctatcagtct
catacaggaattgtctatttgatccctaaatttaaaaccagcggatctggtgaagaaata
agtcatgaaattaatttaaaccaggatatagaaacgctgttcaaggattattttaaatct
aaaaacggaggccaggaagctaatgaagaactgatgaaattgtttaacgaaattttaaat
acctaa
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