Chryseobacterium bernardetii: EG339_10670
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Entry
EG339_10670 CDS
T06826
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cben
Chryseobacterium bernardetii
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cben03019
]
EG339_10670
03009 Ribosome biogenesis [BR:
cben03009
]
EG339_10670
Messenger RNA biogenesis [BR:
cben03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EG339_10670
Ribosome biogenesis [BR:
cben03009
]
Prokaryotic type
rRNA processing factors
EG339_10670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AZB25015
UniProt:
A0A3G6U6C5
LinkDB
All DBs
Position
complement(2290320..2291882)
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AA seq
520 aa
AA seq
DB search
MKKELIVSHEDDLTKIALLEDGRLCELHEQEDKSDFIVGDLFIGRVKKLAPNLNAAFVNI
GYDKDAFLHYQDLGPQYLTYRKFLKDTISKKQNSSSLKNFEIQPEIDKNGTVDKVIAKDD
LVLLQITKEPISTKGPRISTQVSLTGRFLVLIPFDNKVSISKKIKSSEEKERLRTLIDSI
KPEGFGVIIRTVAEGKKVADLHNDMNQLIQKWESTFKNIQKNKVPSKVLSEEDKASAILR
DNFNQDFVNIICDDEQMVNEMTNYVEVIAPEKKNIVQFYDSHIPLLEYYNVEKQLKQSFG
KHVNIPSSKGAYLVIEHTEALHVVDVNSGNNITTGTAVNKEHALKVNKMAATEIARQLRL
RDMGGIIVIDFIDMPNSEHRRELYEHLKEEMKRDKARHKILPPSKFGLIQITRQRNRPEK
QIETKEENPNKDGEIVAPIVIVERMGETLRNILQKEKGKIYLHVHPFVEAYLTKGFLKSI
QMKWFMKYKKWVTIVPRDSFKYLEYRIYNSKKEELIEFSN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaactaatagtttcgcatgaagatgatcttacaaagattgcactgctggaa
gacggaagactatgtgaacttcatgagcaagaggacaaaagcgattttatagttggagat
ctgtttataggaagagtaaaaaagctggcccccaaccttaatgcagcattcgtaaatata
ggatatgacaaggatgcatttctgcattatcaggatctgggaccacaatatcttacatac
agaaagtttttaaaagatacaatctctaaaaaacaaaactcttcaagcttaaaaaatttc
gagatacagcccgaaatagataaaaacggaacagtagataaggtgattgcaaaagacgac
cttgttcttttacagattaccaaggagcctatttctacaaaaggtcccagaatttctacc
caggtttcacttacaggacgttttttggttttaattccatttgacaataaggtttccatt
tccaaaaagatcaaaagttctgaggaaaaggaaagattaagaactctgatcgacagcatc
aagcctgaaggtttcggagtaattataagaaccgtagccgaaggaaaaaaggtagccgac
cttcataatgacatgaatcagctgattcagaaatgggaaagcacttttaaaaatatccag
aaaaataaagttccgtctaaagttttaagcgaagaagacaaggcttcagctattttaaga
gacaattttaatcaggatttcgtcaatatcatctgtgatgatgagcaaatggtgaatgaa
atgaccaattacgttgaagtaattgctcctgaaaagaaaaatattgtccagttttatgat
tctcatattccacttctggaatattataatgttgaaaaacagcttaaacagagcttcgga
aaacatgtaaacataccaagctccaaaggtgcttatcttgttattgagcatacagaagca
cttcacgttgtagacgttaactccggaaacaatattaccaccggaactgctgttaataaa
gaacacgctcttaaagtgaacaaaatggcagccactgagattgccagacagctccgcctc
cgcgatatgggaggcatcattgtaatcgattttatcgacatgcctaattcagagcacaga
agagagctctacgaacaccttaaagaggaaatgaagcgcgacaaggcccgccataaaata
cttcctccaagtaaattcggtctgatccagattaccagacaaagaaaccgtccggaaaag
cagatcgaaaccaaagaagaaaacccgaacaaagacggagaaattgtagctccaattgtg
atcgtggaaagaatgggtgaaacactgagaaacatcctgcagaaagaaaaaggaaaaatc
tacctgcatgtacacccatttgtagaagcttacttaacgaaaggcttccttaaaagtatc
cagatgaaatggttcatgaagtataaaaaatgggtaaccattgttccaagggattctttt
aaatatttagaatacagaatttacaattccaaaaaagaagaattgatagaattctctaat
taa
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