KEGG   Chryseobacterium bernardetii: EG339_11305
Entry
EG339_11305       CDS       T06826                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cben  Chryseobacterium bernardetii
Pathway
cben03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cben00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EG339_11305 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cben03400]
    EG339_11305 (uvrA)
DNA repair and recombination proteins [BR:cben03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EG339_11305 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EG339_11305 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_29 DnaJ_CXXCXGXG nSTAND1 SMC_N RsgA_GTPase AAA_25 AAA_16 nSTAND3 AAA_18
Other DBs
NCBI-ProteinID: AZB25123
UniProt: A0A3G6TB64
LinkDB
Position
2444770..2447334
AA seq 854 aa
MKIFGKNTEGSNKRGLSDQSPSEQNFEGFVRVRGAKEHNLKDVDVDIPRNKLVVFTGISG
SGKSSLAFGTIYAEAQRRYLESVSPYARRLFNQMNVPEVSAIHGLPPAVALQQSRGGTTV
RSTVGSVTTISNLLRMLYSRAGDYPPKQSIIYAEGFSPNTPEGACPVCHGIGRIYDVTEK
SMVPDDSLTIRERAVAAWPSAWQGQNLREILMTLGFDVDKPWKDLPKKERDWILFTDETP
TVPVYSGLSAAEVNRAVKMKLPPSYMGTFTGAKRYVLQTFANTNSQMMKRRVSQYMLNTE
CSECHGKRLKKESLAVKFEGFDIADLSNQSLSQLMAIFTPYAEGRFLSKDKDKHPEKAIV
AQNIAIDLVARLKIMIDLGLGYLSLERSTPSISPGELQRLRLATQVHSNLFGVIYVLDEP
SAGLHPADTEALLAVLIKLKDAGNSMFIVEHEVDIIRHCDWVVDVGPQAGANGGEILYSG
PLEGLQSVERSVTRHYIDPVPVTKEVVRKAEHWLRAINVTRNNIQNLDVSIPLGVLTSIT
GTSGSGKSSLVSQALVELISDYLGQDMEESSDEQPELSQETNIHTSGVITTGMEHIKRLV
RVDQKPIGRTPRSNLATYTGLFDRVRQLFAETELAKKRKYDVGRFSFNVAKGRCAHCKGE
GFVMVELLFLPSVYTPCPTCKGTRYNDKTLEVKYDDKNIAEVLDMTVDQAWDFFSSDRSL
RQSLEVLRQVGLGYIRLGQPATELSGGEAQRIKLASELQRTQKGKTLYVLDEPTTGLHPS
DVEKLIGQLNFLVDAGNTVITVEHDMHVVASSDWVIDLGPGAGKDGGKIIAEGAPRDVAK
NKQSKTAKYLAAYV
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgaaaatttttggtaaaaatacagaaggctctaataagagaggcctttcagatcaaagt
ccaagcgaacagaatttcgagggttttgtacgtgtcaggggagccaaggaacacaatcta
aaagatgttgatgtcgatattccgagaaataaacttgtcgtgtttacggggatatcgggt
tccggtaaatcttctcttgcattcggtacgatctatgcggaagcacagcgaagatatctg
gaatcagtttcaccctatgcaagacgtttatttaatcaaatgaatgttccggaagtcagt
gccattcatggacttcccccggctgttgccctgcaacagagcaggggaggaactaccgtc
cgctctacagtgggaagtgtaacgactatttccaatttattgaggatgttatattcccgg
gcaggggattatccgcccaaacagtctatcatctatgcagaaggattttctcccaacacg
ccggaaggagcatgtcctgtatgccatggtatcggacgcatctacgatgtcacagaaaaa
tcgatggtaccggatgattccctgacaatacgtgaacgggctgtggctgcctggccttcg
gcttggcaagggcaaaatctccgggagattttgatgactttaggatttgatgtcgataag
ccgtggaaggatctgccgaaaaaagaacgggactggatcctgtttaccgatgaaacacct
acagtacccgtttattcagggctgtctgcagcggaggtaaaccgggcagtgaaaatgaaa
ttgccgccaagttatatgggaacttttaccggtgccaaacgctatgttctgcaaacattt
gcaaataccaacagtcagatgatgaagaggcgggtatcacagtatatgctgaatacggaa
tgttcggaatgtcacggaaagagattaaaaaaagaatctttggctgtaaaatttgaggga
ttcgacatcgctgatctatccaatcagtcgttatctcagctgatggccatttttacccca
tatgcggaaggtagatttttatctaaagataaggataaacatcctgagaaagctatcgtt
gcccaaaatattgcgatcgatctcgttgcacggctaaaaatcatgattgatctcggtctg
gggtatctttcgctggagcggagcacgccaagtatttcccccggcgagttacagcggtta
aggctggcgacacaggtacactcaaatctgtttggcgtaatttacgttctggatgaaccc
tctgcgggtcttcatcctgcagatacagaagccttgttggctgttttgataaaattgaaa
gatgcaggcaattcaatgtttatcgtagagcatgaggtggacattatccggcattgtgac
tgggttgtggatgttgggccacaggcgggagccaatggcggggaaatattatatagcggt
cccctggaaggactgcaatctgtagaaaggtcggtaacccgtcattatattgatccggtt
cctgtcaccaaagaggttgtcaggaaagctgaacactggctgcgtgcgatcaatgtcacc
agaaataatatccaaaacctggacgtgtcaattcccttgggcgttctcaccagtattaca
ggtacttcagggtcaggtaaaagcagtctggtaagtcaggcactggtagagctgatatcg
gattatttgggacaggatatggaggaaagtagtgatgaacagcctgaactatcacaggaa
accaatattcatacttcaggcgttatcacaaccggcatggaacacatcaaacggctggta
cgagttgaccaaaagccaattggcagaacaccacgttcaaatctggcaacttatacgggg
ctgtttgacagggtaaggcaattatttgctgaaactgagctagccaaaaaaaggaagtat
gatgtgggacgtttttcttttaatgtagccaagggacgatgtgcacactgcaaaggagaa
ggatttgttatggtagaactgttattccttcccagtgtttatacaccatgtccgacctgt
aagggaacccggtataatgacaaaacactggaagtaaagtatgacgataaaaatattgcc
gaagttttggacatgactgtggatcaggcctgggattttttcagcagcgacaggtcttta
aggcaaagtcttgaagtcctcagacaggtcggtttgggttatatacgtcttggacagcca
gccacagaattatccgggggagaagcacagcgtatcaaattggcatcggaactgcagcgt
acgcaaaaagggaaaaccttgtacgttttggacgaaccaacgacaggactgcatccgtct
gatgtggaaaaattgataggtcagctgaattttttggttgatgccggaaatacggtgatt
acggttgaacatgatatgcatgttgtggcttccagtgactgggttatagatctgggaccc
ggtgcgggtaaagatggcggaaagataattgctgaaggagctcccagggatgtagctaag
aataagcaaagcaaaacagctaaatatttggctgcctatgtttaa

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