KEGG   Chryseobacterium bernardetii: EG339_14335
Entry
EG339_14335       CDS       T06826                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cben  Chryseobacterium bernardetii
Pathway
cben03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cben00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EG339_14335 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cben03019]
    EG339_14335 (rny)
Messenger RNA biogenesis [BR:cben03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EG339_14335 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B EIF4E-T KH_NusA_2nd KH_2 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: AZB25682
UniProt: A0A3G6T8S3
LinkDB
Position
3094905..3096473
AA seq 522 aa
MMIELIVGVVCLVIGAAVGMFFSRSSLNTKAKFIIDDAKKNAENLIEKANVQAESIKKEK
NLQAKEKFLELKSQHDADIQSREKKMQEIEKRTKDKEHKLNDELSKIGKLEKDLDRQIAD
YSKKNEILEKKQHELDTATAKKVEILEKISNYTAEEAKAELVETMKAEAKTRAQAHVQSI
MEEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALEA
VTGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEEE
IIEVGKRTIIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLNV
KLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEIEMKSLLSP
IIQVADAISGARPGARRQVLESYIQRLKDLESAALSFDGVSSAYAIQAGRELRVMVESGK
VNDEVASQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq 1569 nt   +upstreamnt  +downstreamnt
attatgatagaacttatagtcggtgttgtttgtttggtaatcggagcggccgtgggaatg
tttttctccaggagttctctgaatactaaggcaaaatttattatagatgatgcaaagaaa
aacgccgaaaatcttatagaaaaagccaacgtacaggctgaatccataaagaaggaaaag
aacctgcaggctaaagaaaagttccttgaactgaaatcacagcatgatgctgacatccag
tcccgcgaaaagaaaatgcaggagattgaaaaaagaactaaagacaaggagcataagctt
aatgatgagcttagcaagattggaaaacttgaaaaagatttagacagacagattgctgat
tattctaagaaaaatgaaattttggagaagaagcagcacgaattggatactgctacagct
aaaaaagttgaaattcttgaaaagatatcaaactataccgctgaagaagctaaagcagaa
ttggtagaaaccatgaaagcagaagctaaaaccagagctcaggcacacgttcagagcatt
atggaggaagctcagatgaatgctaagaatgaagcgagaaagattgttatccaaaccatt
cagagaatcggtacagaacaggctatcgaaaattccgtatcagtattcaacattgaatct
gatgaagtaaaaggtagaatcatcggtagagaaggtagaaatatccgtgctttagaagcc
gtaacaggagttgagatcatcgttgatgatacccctgaagccatcctgctttcatgcttt
gatccggtaagaagagagatcgcaagattatcacttcacagattggttaccgatggtaga
attcacccggcaagaatcgaagaagttgtagaaaaaacaagaaaacaaattgaagaggaa
attattgaagtaggaaagagaacgattattgatttaggaatccacggattacaccctgag
ttaatcaagatcgttggtagaatgaaataccgttcttcttacggacagaacctgttacag
cactcaagagaagtagctaacattgctgcaactatggctgcagaattaggattaaacgtt
aagctagcgaagagagcgggtcttttacacgatatcggtaaagttcctgagcaggaatca
gaattacctcacgcgctattaggaatgcagtgggctgagaaatacggtgaaaaccctgaa
gtggtaaacgctattggtgctcaccacgacgaaattgaaatgaagtctctgttgtctcca
atcattcaggtagccgatgctatctcaggtgcaagaccaggtgcaagaagacaggtattg
gaatcttatatccagagactgaaagatcttgaatctgcagcattaagcttcgatggagta
tccagcgcctatgcaatccaggcaggtagagagctgagagtaatggtagaaagtggaaaa
gtgaacgatgaagtagcttctcaactgtcttacgatatctctgaaaagatccagaatgag
cttacttaccctggacaggtgaaagtaaccgtaatcagagaaacaagagcagtgaacatt
gcaagataa

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