KEGG   Chryseobacterium bernardetii: EG339_16325
Entry
EG339_16325       CDS       T06826                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cben  Chryseobacterium bernardetii
Pathway
cben03030  DNA replication
cben03430  Mismatch repair
cben03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cben00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EG339_16325 (dnaX)
   03430 Mismatch repair
    EG339_16325 (dnaX)
   03440 Homologous recombination
    EG339_16325 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cben03032]
    EG339_16325 (dnaX)
   03400 DNA repair and recombination proteins [BR:cben03400]
    EG339_16325 (dnaX)
Enzymes [BR:cben01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EG339_16325 (dnaX)
DNA replication proteins [BR:cben03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EG339_16325 (dnaX)
DNA repair and recombination proteins [BR:cben03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EG339_16325 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid DNA_pol3_gamma3 AAA_22 RuvB_N AAA_30 RCF1-5-like_lid AAA_14 AAA_5 AAA_16 Rad17 nSTAND3 AAA_7 TIP49 AAA_24 AAA_18 DNA_pol3_delta_C ABC_tran RNA_helicase AAA_19 AAA_assoc_2 NTPase_1 AAA_2 RsgA_GTPase AAA_33 SRP54 Sigma54_activ_2 NPHP3_N TsaE DUF815 AAA_11 GNAT_acetyltr_2 DEXQc_Suv3 T2SSE AAA_28
Other DBs
NCBI-ProteinID: AZB26039
UniProt: A0A3G6TDX0
LinkDB
Position
3542477..3543562
AA seq 361 aa
MENFIVSARKYRPQEFDTVVGQSHITDTLEHAIEESQLAQALLFCGPRGVGKTTCARILA
RKINEKDGSVSEDGFAYNIYELDAASNNSVDDIRELIDQVRFAPQVGKYKVYIIDEVHML
SSAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRITIEDIQGHLRNIA
QKENIQYEDDALYLIAQKADGALRDALSIFDRLSTFSQRNITLAKAAEVLNILDYDQYLN
IVDLAKENKIPEVLSAFNDIVKKGFDPHIFVAGLGNHFRDLMMAQNTSTIDLIEVGEKTK
SKFIEQGQKWNAQQLIDGIEICNHADINYKNSKNPRLTVEIALMQLASLTANSDVTKKKN
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaaaattttatagtatctgcaagaaaatatcgtcctcaggagtttgacacagtggta
ggacaatcccatattacggatactttagaacatgctattgaagaaagccagctcgcccag
gcgttacttttctgcggtcctcgtggtgtgggcaaaactacctgtgccagaattttagca
agaaaaattaacgagaaagacggtagtgtttcagaagacggttttgcctataatatctat
gaattggatgcagcatccaataactctgtagatgatatcagggaactgatagaccaggta
cgctttgcaccgcaggttggtaaatataaagtatatatcattgacgaggttcatatgctt
tcttctgctgctttcaatgctttccttaaaacactggaagaaccgccggctcatgccatt
ttcattttggcaactacggaaaaacataaaattattccaaccattttatcccgttgtcag
atctacgattttaaaaggatcactattgaagacattcagggacatcttagaaatattgcc
cagaaagaaaatatccagtacgaggatgatgctttatatctgatcgctcaaaaagcggat
ggagcattaagagatgcactttctattttcgacaggctttctacattctctcagagaaat
attaccctggcaaaagctgctgaagtactaaacattctggattatgatcaatatctgaac
attgtagatcttgccaaagaaaataaaattcctgaagttctttctgcattcaatgatatt
gttaaaaaaggttttgacccacatatctttgttgccggattaggaaatcacttcagagat
ttaatgatggctcaaaatacttcaaccatagatctgattgaagtaggagaaaagacaaaa
tccaagtttatagagcagggtcagaaatggaatgcacaacagcttattgatgggattgaa
atctgtaaccatgcagatattaattacaaaaactccaaaaacccaagacttactgttgag
attgcattaatgcaattggcttcgctgactgctaattcagacgttactaaaaaaaaaaat
tcctga

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