Chryseobacterium bernardetii: EG339_18650
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Entry
EG339_18650 CDS
T06826
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cben
Chryseobacterium bernardetii
Pathway
cben02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EG339_18650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cben03021
]
EG339_18650
Transcription machinery [BR:
cben03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EG339_18650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AZB26461
UniProt:
A0A3G6TUN9
LinkDB
All DBs
Position
4061811..4062677
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVELAQRIRAGDRAALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALNTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaatcactaagcaggttaccaacagggaaactgcttcattagacaag
tatttgcaggaaattggtaaagtagaactgattactgcggacgaggaagtagaattggca
caaagaatacgtgctggcgacagagccgcattggagaaattaattaaagccaaccttcgt
ttcgtagtttctgtatctaagcaataccaaaaccaaggtctttccttacccgatttgatt
aatgagggtaacttaggattaatgaaggcggcaaaaaggtacgatgaaactagaggtttc
aaatttatctcttatgcagtatggtggatccgtcaatcaattttacaggcgttggctgag
caatcaagaattgtaaggcttccattgaacaaaattggttccatcaataaaattaataaa
gcatacgctcaccttgagcaggaaaatgaaagaccaccttctccggaagaattggctgaa
gttcttgacatgagtgaggaagatatcaaagaatctatgaaaaactccggtagacacctg
tctatggatgcacctttagtagaaggtgaagattctaatctttatgatgtattacgttca
ggagaatctccaagtcctgataaagacttaatgcttgaatctcttcagattgaaattgaa
agagcattaaacactttaactccaagagaggctgatttggtaagattatatttcggactg
aacggaaagcacccaatgactttagaagaaattggtgaaactttcgatcttacaagagag
agagtccgtcagatcaaagaaaaagcaattaagagactaaaacacaataccagaagtaag
atccttaagtcttatttgggtaaataa
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