Chryseobacterium bernardetii: EG339_18785
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Entry
EG339_18785 CDS
T06826
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
cben
Chryseobacterium bernardetii
Pathway
cben00541
Biosynthesis of various nucleotide sugars
cben01100
Metabolic pathways
cben01250
Biosynthesis of nucleotide sugars
Module
cben_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EG339_18785 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cben01005
]
EG339_18785 (kdsB)
Enzymes [BR:
cben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
EG339_18785 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
cben01005
]
Lipid A
EG339_18785 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
RNase_Zc3h12a
Ribosomal_L27A
Motif
Other DBs
NCBI-ProteinID:
AZB26486
UniProt:
A0A3G6TIN4
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Position
complement(4093125..4093847)
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AA seq
240 aa
AA seq
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MKIIAVIPARYEASRFPGKLMQILGERTVITTTYQNVVETGLFDEVFVATDSEIILEEIT
KNGGKAVMTGQHETGSDRIAEAVQNIDCDIVINVQGDEPFLKLEPLKQLIEVFKQDEQQE
ISLASLKIKLSEKEEIENPNNVKVITDNNGFALYFSRSVIPFHREISYDVKYFKHIGVYA
FRKEALLQFSKLEMKPLEISEKIECIRYLEYGMKIKMIETNFVGVGIDTPEDLEKARKLM
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatcgctgtcatccctgcgcgctatgaagcaagccgttttccgggaaaactg
atgcagatactgggagaaagaaccgttattaccaccacctatcagaacgtagtggaaacc
gggctgtttgatgaagtatttgttgcaacagattccgagatcatcctggaggagattact
aagaatggcggaaaagctgtaatgacgggacaacatgagacaggaagcgaccgtattgcc
gaagcagtacaaaatatagactgtgatatcgttattaatgttcagggtgatgagccattc
cttaagcttgaacctttgaaacagctgatcgaagtttttaagcaggacgaacagcaggaa
atttccctggcttccctaaaaataaaactatctgaaaaagaagaaatagaaaacccgaat
aatgtaaaagtgattacggataataacggctttgccttatatttcagtcgctccgtaatt
ccttttcacagagaaatatcttatgatgtgaaatactttaaacatattggagtgtatgcg
ttcagaaaagaagcattattacagttttcaaagctggagatgaaacctctggaaatatct
gagaagatagaatgtatccgttatcttgaatacggaatgaaaatcaaaatgatagaaacc
aattttgtcggggtaggaattgatacaccggaagatctggaaaaagcaagaaagttgatg
taa
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