Chryseobacterium bernardetii: EG339_19525
Help
Entry
EG339_19525 CDS
T06826
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cben
Chryseobacterium bernardetii
Pathway
cben03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG339_19525 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cben03019
]
EG339_19525 (recQ)
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_19525 (recQ)
Enzymes [BR:
cben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG339_19525 (recQ)
Messenger RNA biogenesis [BR:
cben03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EG339_19525 (recQ)
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EG339_19525 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AZB26626
UniProt:
A0A3G6TJ30
LinkDB
All DBs
Position
complement(4243674..4245878)
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEQIIENLLNGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKDDYLDFLKEVKISFFAIDEAHCISEWGHDFRPEYRNLKQIIDKIANVPVIALTA
TATPKVQDDIQKTLGMTNALVFKESFNRPNLYYEVCPKINIDKEIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGESFDPVKGDGAKMCDNSSNPPKLKDATADLTKA
LELIKDTGEKFKAKDLISVIVGKETAVTKSYKLEQNPHFGFGKEEKDNYWKTILRQATVQ
NFLQKDIETYGVLKIAEKGRKVLDGKSKDVFLIAEDREFDLTQAKADSDQLQQQAGGGLD
QKLFNLLKDLRKKVAKKHGIPPYTVFMDPSLEDMTVQYPITVDEINKIYGVGEGKAKKYG
KEFADYIKTYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMDE
LLKEMERIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKILLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcaggcgaattgaaaaagtattttgggttttctaca
tttaagggacagcaggaacagattatagaaaacctattaaatgggaaggatatatttgtt
ttgatgcctacaggtggtggtaaatcattatgttatcagcttccggcacttatttcggag
ggaacagccattgttgtttcacctttaatagcgttaatgaagaatcaggtggatgccgta
aacggactgtcatccgatgatggggtagcgcatgtattaaattcatcattaaacaagaca
cagacaaaacaggtttttgacgatattaaaagcggaaaaaccaagcttttgtatgttgct
cctgaatcattgattaaagatgattatctggactttttaaaagaagttaagatttctttc
tttgctattgatgaggctcactgtatttcagagtggggacatgatttcagaccggaatac
agaaatcttaaacagattattgataagattgccaatgtaccggtgattgcccttacggct
acagctacgccgaaggtgcaggatgatattcagaaaactttaggaatgaccaatgccttg
gtctttaaagaaagctttaaccgtccgaatctatattatgaggtatgtcctaaaattaat
atagacaaggagatcgttaaatttatcaatcagcataaaggaaaatcaggaattgtctat
tgtctgagcagaaggaaagtggaggaattcgcacagcttctgcaggttaacgggatcaat
gcccttccttaccatgcaggtctggatcagaaggtgagagttgctaatcaggataagttc
ctgatggaagaggtggatgtaattgtagccaccattgctttcggaatgggaattgataag
ccggatgtacgttttgtgatccactatgatttccctaaatcattggaaagctattatcag
gaaaccggaagagcgggaagagacggcggcgaaggccattgccttgcattctatgatcct
aaagatattgaaaaactggaaaaattcctggctcagaagcctgtatccgaaagagaaatc
ggactacagcttttaaatgaagtagtaggctatgctgagacctctatgagccgaagacag
tatattctttattatttcggagaaagctttgatcctgtgaaaggagatggcgcaaagatg
tgtgataattcatccaatcctccaaaactaaaagatgctacggcagatttaacgaaagct
cttgaactgattaaagatacaggagaaaagttcaaagcaaaagatcttatttctgttatt
gtaggtaaagaaaccgccgtaaccaagtcttataaacttgaacagaaccctcattttggg
tttggtaaagaggaaaaagacaattattggaaaactattctgagacaggcaactgttcag
aatttcttacagaaagatattgaaacatacggggtcttaaaaattgcagaaaaaggaagg
aaagtattggatggtaaatctaaggatgttttcttaattgctgaagaccgggaatttgat
cttacacaggctaaagcagatagcgatcagctgcagcagcaagccggaggaggtttagac
cagaaactgtttaatctattaaaggatttaagaaaaaaagtagccaaaaaacacggtatt
ccaccttatacagtatttatggatccgagtttggaggatatgacggttcaatatccgatt
accgtagatgaaatcaataaaatttatggagtaggagaagggaaagccaaaaaatatggc
aaagaattcgctgactacattaaaacttatgttgaagacaataatatagaacgtactcag
gatatggtcctgaagcaggtggccaacaaatccagccacaaagttttcattatccaaagt
actgataaaaagatcgaccttgaagatattgcaagagcgaaaaatctttctatggatgaa
cttcttaaggaaatggaaagaattgtttatcagggtacaaaattgaatatcgattactat
atcgaagataactttgacgaagatattgtagatggtttcatggaattcatgaacgaatct
gaaagtgacagcatgaagatcctattggatgaattcggagatgaattgtctgatgaagaa
gtaagaatgctgagaattaaatttatcagtgacgttgctaactaa
DBGET
integrated database retrieval system
