Chryseobacterium bernardetii: EG339_22480
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Entry
EG339_22480 CDS
T06826
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cben
Chryseobacterium bernardetii
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cben03032
]
EG339_22480
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_22480
Enzymes [BR:
cben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG339_22480
DNA replication proteins [BR:
cben03032
]
Prokaryotic type
DNA Topoisomerases
EG339_22480
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG339_22480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZB27155
UniProt:
A0A3G6U3M4
LinkDB
All DBs
Position
4900854..4901960
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTDLEIISHLKPSKIVKIMKDPEASAKAVHLIYTTDAETAGITRKKTGKKYSYYKDG
EKIRDKDEITRINKLVIPPAWENVWICALENGHLQATGFDVKKRKQYRYHPLWSALRNHT
KFYRMLQFGYALPNIRLHIEQDLALRNFEKRKILALIVSLMQRTNIRIGNNVYEKLYGSF
GLTTLKDKHVEIKGQKITFSFKGKKGIMHHVDLRSKRLARLVQKCKDIPGKELFQYLDDE
GNRHSIDSGMVNEYIKEISGDDFTAKDFRTWSGTVSALIAFKEIGYAESNTEYKKKVKEA
LDMVAENLGNTTAVCKKYYVHPLVINLYENNTIKKYLDELEVIEENDGKADLTKEEKLVI
KILENEKL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacagatttagagattatttctcaccttaagccatcaaagattgttaaa
atcatgaaggatccggaagcttctgcaaaggcggtacatcttatttataccaccgatgca
gaaacagccggaatcacgcgtaaaaaaacaggaaagaaatattcttattataaggatgga
gaaaagatccgtgataaggatgaaataacccgcatcaataagctggttattcctccggcg
tgggaaaatgtatggatctgtgccctggaaaatggccatcttcaggctacaggttttgat
gttaagaaaagaaagcagtaccgctatcatcctttatggagtgcattaagaaaccataca
aaattctacagaatgcttcagtttggctatgccttacccaacatcaggcttcatattgag
caggatcttgctttgcgtaattttgaaaaacggaaaatactggctctgatcgtaagtctt
atgcagagaaccaatatccgaatcggcaataatgtgtatgagaagctgtatggttctttc
ggactcactaccttaaaggataaacatgttgaaattaaaggacaaaagatcacgttttca
tttaaagggaaaaaagggattatgcatcatgttgatctcagaagcaagagattggcaaga
ctagtacagaaatgcaaggatattcccggtaaagagctttttcagtatctggatgatgaa
ggaaaccggcattctatagattccgggatggtgaatgaatacataaaagaaataagcggt
gatgattttacggccaaagatttcaggacatggtccggaacagtaagcgctctgatcgct
tttaaggaaataggatacgcggaaagcaacactgaatacaaaaagaaagtaaaagaagcc
ctggatatggtggccgaaaatcttggaaatactactgcggtctgtaaaaagtactatgtt
catcccctagtgatcaatctttacgaaaataacaccattaaaaaatatcttgacgaactg
gaagtcattgaagaaaatgacggcaaagctgatctgacgaaagaggagaaactggtgatt
aagattttagagaacgagaagttgtag
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