Chryseobacterium bernardetii: EG339_22900
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Entry
EG339_22900 CDS
T06826
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
cben
Chryseobacterium bernardetii
Pathway
cben03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EG339_22900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cben03400
]
EG339_22900
DNA repair and recombination proteins [BR:
cben03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EG339_22900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
DUF4404
Motif
Other DBs
NCBI-ProteinID:
AZB27230
UniProt:
A0A3G6TMB3
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Position
4987236..4989383
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AA seq
715 aa
AA seq
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MYIDKEDLDELEFPQLLAEISPFAYSPKTREKILQLRPMEIDEAELSLKKTSEYLSSFES
SNAIPFDEYEDIESELKLMLIENYRLENSAFIKIKTITEQIGRLQKFFPTMPETFPTLLE
EVSVLEFRKEIIEKVDKVFNRFGEVKSEASPALKGIRTEIQHAKKAIQENFNRALTTYGQ
SDFLDDIRETIIDDQRVLAVKSGFKKRVPGRTLGISKTGSITYIQPDSVVKHYFKLRENE
EEEKKEIDKVLRKLTAELAEFQPQLWRYQMYIFDLDLVRAKAKFAELINGVLPKINRHKT
LRLKDAFHPLLWLRNKVENKTIYSQTLTLTEYNRIICISGPNAGGKSITLKTVGLLQLMI
QSGILVPVHPKSEMFFFEKIMTDIGDNQSIENHLSTYSSRLKKMSGIIREADADTLLLID
EFGTGSDPELGGALAESFMEFFYDKKSFAIITTHYTNIKLVIEQLPNAQNAAMLFNEETL
EPMYKLEVGQAGSSFTFEVAEKNKIPRFIIHSAKKKVEHDIVNLDKTIVKLQQEKFEVEK
LKSDLAERKESVEDKRDNLQKLNDQLQQKLFNFQKLYEEEHRKLQFGNKIEAFIDSYTKG
KSRKDVVKDFVKLLEQEKFRKLGADKDESKRLQVVKRKITQQLKKEEVIEKIAETNEKLE
EKRKSDRAVWMKIGQRVRITGSTSVGTIEKISRNKVIVNYGTFKTTIDADELERI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgtatatagataaagaagatttagacgaattagagtttccgcaattgctcgcggaaatc
tccccatttgcgtattctccgaaaacaagagaaaaaattcttcaacttcgtccgatggaa
attgacgaggcagaactttcattaaaaaaaacatcagaatacctgtcaagttttgaaagt
tcaaatgcgattccgtttgatgaatatgaagatattgaaagtgagctgaaactgatgctg
attgagaattaccgtctggaaaacagtgctttcatcaaaataaaaaccatcacggaacag
attggaagattacagaagttcttccctaccatgccggaaacatttcccactttactggaa
gaagtttctgtactggaattcagaaaagagatcatcgagaaggttgataaggtattcaac
cgttttggtgaagtaaaaagtgaagcttctcctgccttaaaagggataagaactgagatc
cagcatgctaaaaaagcaattcaggaaaacttcaaccgtgctcttaccacgtatgggcag
agtgactttttggatgatatacgggaaaccattattgatgaccaacgggttttagcggta
aaatcaggatttaagaaaagagttccgggaagaacccttggaatttcaaaaaccggttct
atcacctatatccagccggatagcgttgtaaagcattactttaagcttcgtgaaaatgaa
gaggaagaaaaaaaagagattgataaggttttaagaaagcttactgctgaactggcagaa
ttccagccccagctttggagatatcagatgtatatttttgatcttgacctggtgagagcc
aaagctaagtttgcagaacttatcaatggagtgcttcctaagatcaaccgtcataagaca
ttgaggttaaaagatgcctttcatcctttgttgtggttaagaaataaggtagagaacaaa
acgatttactcgcagactctgacattaacagaatataacagaattatctgtatttccggg
ccaaatgccggtggaaaatcaatcacattgaaaactgtcggattattacagctgatgata
cagagtggtattctggttcctgttcatccaaaatctgaaatgtttttctttgagaaaatc
atgactgatattggtgataatcaatctatagaaaaccacctttctacttattcatcaaga
ttaaagaaaatgtccggaatcatccgtgaggctgacgcagacacgcttttactgattgat
gagttcggaacaggctctgatccggaattgggaggcgctctggctgaaagtttcatggag
tttttctatgataaaaagagttttgcgattattacaacgcattacaccaatatcaagctg
gttatagaacaacttccgaacgctcagaatgcagcgatgcttttcaatgaggaaacactg
gaacctatgtataagctggaagtaggacaggctggaagctcttttacttttgaagtggct
gaaaagaataagatcccaaggtttattattcattctgccaagaaaaaggtagagcatgat
attgtgaatcttgataaaacgatcgtaaaactgcaacaggagaagtttgaagttgaaaaa
ctgaagtctgatcttgcagaaagaaaagaatctgtagaagataaacgtgataaccttcag
aagctgaatgaccagcttcagcagaaacttttcaatttccagaagctatatgaggaggaa
caccgtaaacttcagttcgggaacaagattgaagctttcattgatagctatacgaaagga
aaatccagaaaagatgtggtaaaagattttgtaaagttgcttgaacaggaaaaattcaga
aaactaggtgctgataaagatgaatccaagcgtctgcaggtagtgaaaagaaaaattacg
caacagcttaaaaaggaagaagtgatagaaaagattgctgaaacgaatgaaaagctggag
gaaaaacgtaagagtgaccgtgcagtctggatgaaaatagggcagcgcgtccgaattacc
ggaagtaccagcgtaggaactattgaaaaaatctccagaaataaggtgattgtgaattat
ggaactttcaaaacaacgattgatgcggatgaattagagagaatctaa
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