Chryseobacterium bernardetii: EG339_24150
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Entry
EG339_24150 CDS
T06826
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cben
Chryseobacterium bernardetii
Pathway
cben00020
Citrate cycle (TCA cycle)
cben00640
Propanoate metabolism
cben00660
C5-Branched dibasic acid metabolism
cben00720
Other carbon fixation pathways
cben01100
Metabolic pathways
cben01110
Biosynthesis of secondary metabolites
cben01120
Microbial metabolism in diverse environments
cben01200
Carbon metabolism
Module
cben_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cben_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cben00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EG339_24150 (sucD)
00640 Propanoate metabolism
EG339_24150 (sucD)
00660 C5-Branched dibasic acid metabolism
EG339_24150 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
EG339_24150 (sucD)
Enzymes [BR:
cben01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EG339_24150 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
GFO_IDH_MocA
DapB_N
Motif
Other DBs
NCBI-ProteinID:
AZB27463
UniProt:
A0A3G6U4F3
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All DBs
Position
complement(5279563..5280435)
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AA seq
290 aa
AA seq
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MSILVNKDSKVIVQGFTGNEGTFHASQMIEYGTNVVGGVTPGKGGSEHLGKPVFNTVADA
VEKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPVADMVKVKSYIADRDCRLI
GPNCPGIITSEEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGYGISTAIGIGG
DPIIGTTTREALELFINDPETEAVVMIGEIGGGLEAEAARWYKASGSTKPVVGFIAGQTA
PKGRTMGHAGAIVGGAEDTAQAKMEIMRENGINVVDSPADIGATVAKILG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagtaaacaaagattctaaagtaattgtacaaggatttacagggaacgaa
ggtactttccatgctagccagatgattgaatacggaacaaacgtagtaggtggtgttact
ccaggaaaaggaggaagcgagcacttaggaaagcctgtattcaacacagtagctgacgct
gttgaaaaagcaggagcaaacgtaagtattattttcgtaccaccggcatttgcagcagac
gctatcatggaagctgctgaagcagggatcaaagtaattgtatgtattactgaaggtatt
cctgtagctgatatggtaaaagtaaaatcttatatcgctgacagagactgcagattaatc
ggaccaaactgccctggaatcattacttctgaagaagctaaaattggtattatgccaggt
ttcgttttcaaaaaaggtaaagtaggtatcgtttcaaaatcaggtacacttacttacgaa
gctgctgatcaggtagtaagagcaggttacggtatttctacagctatcggtatcggtggt
gacccaattatcggaactactacaagagaagctcttgaattattcatcaacgatcctgaa
actgaagctgttgtaatgattggtgaaattggtggtggattagaagctgaagctgctaga
tggtataaagctagcggatctactaagccggttgtaggatttattgctgggcaaacagct
ccaaaaggaagaacaatgggacatgctggtgctattgtaggtggtgcagaagatacagct
caggcaaaaatggagatcatgagagagaatggtatcaacgttgttgattctcctgctgat
atcggtgctactgtagcaaaaattctaggataa
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