KEGG   Cognaticolwellia beringensis: B5D82_00525
Entry
B5D82_00525       CDS       T05628                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cber  Cognaticolwellia beringensis
Pathway
cber00010  Glycolysis / Gluconeogenesis
cber00020  Citrate cycle (TCA cycle)
cber00260  Glycine, serine and threonine metabolism
cber00280  Valine, leucine and isoleucine degradation
cber00310  Lysine degradation
cber00380  Tryptophan metabolism
cber00620  Pyruvate metabolism
cber00630  Glyoxylate and dicarboxylate metabolism
cber00640  Propanoate metabolism
cber00670  One carbon pool by folate
cber00785  Lipoic acid metabolism
cber01100  Metabolic pathways
cber01110  Biosynthesis of secondary metabolites
cber01120  Microbial metabolism in diverse environments
cber01200  Carbon metabolism
cber01210  2-Oxocarboxylic acid metabolism
cber01240  Biosynthesis of cofactors
Module
cber_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cber_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cber_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
cber_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cber_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cber00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    B5D82_00525 (lpdA)
   00020 Citrate cycle (TCA cycle)
    B5D82_00525 (lpdA)
   00620 Pyruvate metabolism
    B5D82_00525 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    B5D82_00525 (lpdA)
   00640 Propanoate metabolism
    B5D82_00525 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    B5D82_00525 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    B5D82_00525 (lpdA)
   00310 Lysine degradation
    B5D82_00525 (lpdA)
   00380 Tryptophan metabolism
    B5D82_00525 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    B5D82_00525 (lpdA)
   00670 One carbon pool by folate
    B5D82_00525 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cber04147]
    B5D82_00525 (lpdA)
Enzymes [BR:cber01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     B5D82_00525 (lpdA)
Exosome [BR:cber04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   B5D82_00525 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA NAD_binding_8 Pyr_redox_3 HI0933_like FAD_binding_2 Thi4 AlaDh_PNT_C FAD_binding_3
Other DBs
NCBI-ProteinID: ASP46387
UniProt: A0A222G371
LinkDB
Position
122115..123545
AA seq 476 aa
MSNDIKTQVVVLGAGPGGYSAAFRAADLGLDVILVESRETLGGVCLNVGCIPSKALLHVA
KVIDDAAAMASHGVTFGAPKIDLDKIRGWKEDVISQLTGGLGGMAKARKVKTVFGYGKFT
SDKTIEVEGADGKTTITFDNAIIAAGSSVVDLPFIPTEDPRVIDSTGALELQDIPKEMLV
LGGGIIGLEMGTVYRALGSNVSVVEFADQLVPAADKDIVKVYTNYNKKKFNIMLSTKVVA
VEAKDDGLYVTFEGKNAPEGQVRYDKILVAVGRKPNGHLVAADKAGVNVDERGFINVTNE
LRTNVNHIFAIGDVVGQPMLAHKAVHEAHCAAEVISGKKHTFEPRCIPSIAYTDPEMAWV
GVTEREAKEQGLNIEVANFPWAASGRAIASARTEGKTKMIFEKETGRVLGGAIVGINAGE
MLGEVCLAVEMGADAEDIGLTIHAHPTLNESIGMAAEIFEGTITDMPNAKAVKKKK
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagtaacgatattaaaactcaagtagtagttttaggtgcgggtcctggtggctattca
gcagcatttcgcgcagcagatttaggtttagacgtaatattagttgaaagccgtgaaacg
cttggtggcgtttgtttgaatgtgggttgtatcccttcaaaagcacttttacacgtagct
aaagttattgacgatgcagcagcaatggcttctcatggtgttacttttggcgctcctaaa
attgatttagacaaaattcgtggctggaaagaagacgttattagtcaattaaccggtggt
ttaggcggaatggctaaagcacgtaaagttaaaacagtatttggttacggtaaattcact
tcagataaaaccattgaagtagaaggcgctgacggtaaaacaaccattacttttgacaac
gcgattattgctgctggttcatcagtagttgatttacctttcattccaactgaagaccca
cgtgtaatcgattcaacgggcgctttagagcttcaagacataccaaaagaaatgttagta
cttggtggcggcattattggtttagaaatgggcacggtatatcgcgcgttaggctcaaat
gtttcagttgttgagtttgctgaccaattagtgccagcggctgataaagatattgttaaa
gtttacactaactataacaagaaaaaattcaacattatgttgtcaacaaaagtcgttgcc
gttgaagccaaagacgatggtttatatgttacttttgaaggcaaaaatgcccctgaagga
caagtacgctacgacaaaattttagttgctgttggtcgtaagccaaacggtcacttagtt
gctgcagataaagctggtgttaatgttgatgagcgtggctttattaacgtaacaaatgag
cttcgcactaacgttaatcacattttcgctattggtgatgttgtgggtcaacctatgctt
gctcataaagcggtacatgaagcacattgtgctgctgaagtgatttctggtaagaaacat
acttttgaaccacgttgtattccttcaattgcttatactgatccagaaatggcttgggta
ggtgttacagaacgtgaagcgaaagagcaaggtttgaacattgaagtggctaacttccct
tgggctgcttctggtcgtgcaattgcttctgcgcgtactgaaggtaaaactaagatgatc
ttcgaaaaagaaactggccgtgtattaggtggtgctattgtgggtatcaacgccggcgaa
atgcttggtgaagtttgtttagccgttgaaatgggcgcagatgctgaagacataggtctt
actattcatgctcacccaacgttaaatgaatcaatcggtatggctgcagagatttttgaa
ggcaccattactgatatgccaaacgctaaagccgttaaaaagaaaaaataa

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