Cognaticolwellia beringensis: B5D82_01580
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Entry
B5D82_01580 CDS
T05628
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
cber
Cognaticolwellia beringensis
Pathway
cber02020
Two-component system
cber02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B5D82_01580
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B5D82_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cber03000
]
B5D82_01580
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cber02035
]
B5D82_01580
Transcription factors [BR:
cber03000
]
Prokaryotic type
Helix-turn-helix
Other families
B5D82_01580
Bacterial motility proteins [BR:
cber02035
]
Flagellar system
Flagellar assembly proteins
Others
B5D82_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_7
Mg_chelatase
bpMoxR
AAA_16
MCM
AAA_2
HTH_50
AAA
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
ASP49832
UniProt:
A0A222GDR5
LinkDB
All DBs
Position
374186..375664
Genome browser
AA seq
492 aa
AA seq
DB search
MQGQKHILVVDNDAARRHQIETVLAFVGEHFHVFPEDEIDKHLTAIPNILNIILCGDISP
KLQNVIKSNPKYPFIYHDVIDKKQLNGYVNVIGELTTPLNYAQLTELVHHSHQYHNNLPS
KRSASSPSSLFRSLVGTSEPMQQVRFLIEQVACTSANVLILGESGTGKEVVARNIHDLSD
RSKGPFVPVNCGAIPAELLESELFGHEKGAFTGAISTRKGRFEMAEGGTLFLDEIGDMPQ
PMQVKLLRVLQERTFERVGGAKSLKADVRIVAATHQHLEDMIKTNHFREDLYYRLNVFPI
ETPSLRERKEDIPLLLKELISRFSAEQGQSVRFTDKAIESLKEHPWAGNVRELSNLIERM
IIMYGEQVVNVGQLPLKYRHLDVDDYQPEYPEELQEREAINELFSGFDYDDEDDDTDETN
TEDTTAVNGKTVDVLPNDGLNLKEYLAELEISLIKQALDKNEWVVARSAELLDMRRTTLV
EKMRKYNLQKVS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggcaaaaacatattctagtcgtcgataacgacgctgcaagacgccatcaaata
gaaaccgttttagcctttgtgggtgaacattttcatgtttttccggaagatgaaattgat
aaacatttaactgccatccctaatattcttaatattattttatgcggtgacatttcccca
aagttacaaaatgttattaaatcaaacccaaaatacccatttatctatcacgacgttatt
gataaaaagcagcttaatggttacgtcaatgttattggtgaattaactacaccgctaaat
tatgcgcaattaacagagctagtgcatcatagtcatcaatatcacaataacctgccgtca
aaacgtagcgcaagtagtcctagttcattatttcgctctttagtgggtacgagcgagcct
atgcagcaagtacggtttttaattgaacaagttgcttgtacctcggctaatgtacttata
ttaggtgaatcaggtactggtaaagaagttgttgcacgaaatattcatgatctatccgac
agaagcaaagggccctttgtaccagttaactgtggtgctattcctgctgagttgctagaa
agtgaattgtttggtcacgaaaaaggcgcttttactggtgctatttctacacgaaaaggc
cgctttgaaatggcggaaggtggcacgctatttcttgatgaaattggtgatatgccacaa
cccatgcaagtaaaattattacgtgtattacaagagcgaacatttgaacgtgtgggcggt
gctaaaagcttaaaagctgatgtacgcattgttgcggcaacgcatcagcacttagaagat
atgattaaaactaaccattttcgtgaagatctttattatcgattaaatgtttttcctatt
gaaactccttcacttagagagcgaaaagaagatattccgctcttgctgaaagagcttatt
tcaagattttcagccgaacaaggacaatcggtacgctttactgataaggccattgagtcg
cttaaagaacacccttgggctggtaatgtgcgagaactgtctaatttaattgagcgcatg
attattatgtatggtgaacaagtggttaatgttgggcaactaccattgaagtaccgccac
ctagacgtagatgactatcaaccggaatatcctgaagaactgcaagagcgtgaagcgatt
aacgaacttttctctggttttgattatgacgacgaagacgatgatacagacgaaacaaat
actgaagatacgaccgcagtaaatggaaaaacagtcgatgtccttccaaacgacggcttg
aacttaaaagagtatttagctgagctagaaatttcattgatcaagcaagcattagataaa
aatgaatgggttgttgcacgttctgctgagcttttagatatgcgccgaaccacgttagtg
gaaaaaatgcgtaaatataatctccaaaaagtaagctaa
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