Cognaticolwellia beringensis: B5D82_01600
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Entry
B5D82_01600 CDS
T05628
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
cber
Cognaticolwellia beringensis
Pathway
cber02020
Two-component system
cber02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B5D82_01600
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B5D82_01600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cber02022
]
B5D82_01600
02035 Bacterial motility proteins [BR:
cber02035
]
B5D82_01600
Two-component system [BR:
cber02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
B5D82_01600
Bacterial motility proteins [BR:
cber02035
]
Flagellar system
Flagellar assembly proteins
Others
B5D82_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
FleQ
Mg_chelatase
HTH_24
MerR
AAA
AAA_16
HTH_23
HTH_20
HTH_28
MCM
HTH_11
Sigma70_r4_2
AAA_7
HTH_Tnp_ISL3
DUF2089
HTH_AsnC-type
nSTAND3
AAA_19
AbiEi_4
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ASP46586
UniProt:
A0A222G3S4
LinkDB
All DBs
Position
379140..380480
Genome browser
AA seq
446 aa
AA seq
DB search
MSTSKIMVVEDDAGLREALVDTLLLAGYQCLAVDSGEDALIKLKSHAVDLVVSDVQMGGM
SGLSLLKSIRSNYPKLPVLIMTAYGTIDDAVQAMRDGACNYMAKPFAPEVLLNMVSQYVP
LQANDGCDPVVADAQSLELLKLAKKVANTEASVMVLGPSGSGKEVLAQYIHNYSPRSQAP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQASPGKFEQAQGGTILLDEITEMDLGLQAK
ILRVLQEREVERIGGRKTINLDVRVIATSNRDLKDAVQEGIFREDLYYRLNVFPLTWLPL
NERRDDILPLATHLISRICQKDGNVIPEFTVAARSKLLAYDWPGNVRELDNVIQRALILQ
SDRCIDANDLLIDNFETPQVKSESVDSAKADKLGSELKLQEHQIILDTLHACRGSRKDVA
ERLGISPRTLRYKIARMRDSGIQIPI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaagtaaaattatggttgttgaagacgatgcaggacttagagaagcactcgtt
gatactttactgttagctggctatcaatgtttagcagtagactcaggcgaagacgcgctg
ataaaactcaaatcgcatgctgtcgacttagtggttagcgatgtacaaatgggtggtatg
tctggactatcgttgttaaaaagtattcgtagtaattatccaaaactaccggtattgatc
atgacagcgtacggcaccattgatgacgctgtacaagctatgcgcgacggtgcctgtaat
tatatggcgaaaccttttgcgccagaagtgttattaaatatggtgagtcagtatgttcca
ctacaagcaaatgacggttgtgatcccgtcgtggcagacgctcaaagtcttgagttactt
aaactagccaaaaaagtggccaatactgaagcttctgtgatggttttagggccaagtggc
tcaggtaaagaagtgctagctcaatatattcacaattactcgccacgaagccaagcgcct
tttgtcgctattaattgtgcagctattcctgaaaatatgcttgaagcaactttatttggt
tatgaaaaaggtgcctttacgggcgcaattcaagccagcccaggtaagtttgaacaagca
caaggcggtaccattttacttgatgaaattaccgaaatggatttaggtttacaagcaaaa
attctgcgggtgctacaagaacgagaagtagaacgcatcggtggacgtaaaacgattaac
ttagatgttagggtcattgctactagtaaccgcgatctaaaagatgctgtacaagaaggc
atttttagagaagatttatactatcgtctcaatgtattcccattaacgtggttgccactt
aatgaacgtcgagatgatattctgccactggctacacatctaatttcgcgcatttgtcaa
aaagatggcaatgttattcctgaattcaccgttgctgcgcgcagtaaattattggcttac
gactggcctggtaatgtgcgtgaattagataacgttattcagcgagcgttaattctacaa
agcgatcgttgtatcgatgcgaatgatttattaattgataatttcgaaacgcctcaggta
aaaagtgagtcagttgactcagccaaagctgacaaactaggcagtgaacttaaattgcaa
gaacatcaaataatattagataccttgcatgcttgtcgaggcagtcgcaaagatgtggct
gagcgtctagggatcagtccacgcaccttacgttataaaattgctcgaatgcgagatagt
ggtatacaaattccaatttaa
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