Cognaticolwellia beringensis: B5D82_01945
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Entry
B5D82_01945 CDS
T05628
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00521
Streptomycin biosynthesis
cber00523
Polyketide sugar unit biosynthesis
cber00525
Acarbose and validamycin biosynthesis
cber00541
Biosynthesis of various nucleotide sugars
cber01100
Metabolic pathways
cber01110
Biosynthesis of secondary metabolites
cber01250
Biosynthesis of nucleotide sugars
Module
cber_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
B5D82_01945 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
B5D82_01945 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
B5D82_01945 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
B5D82_01945 (rfbB)
00525 Acarbose and validamycin biosynthesis
B5D82_01945 (rfbB)
Enzymes [BR:
cber01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
B5D82_01945 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
ASP46649
UniProt:
A0A222G499
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All DBs
Position
455508..456608
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AA seq
366 aa
AA seq
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MKKLLVTGGAGFIGANFVHYWMEKYSADKVVVLDALTYAGNIANLDSVKDHANFTFVHGN
ICDQALIERLLVEHGIDTLVHFAAESHVDRSITGPDAFIETNIMGTYSLLKAAKKVWLDG
ESIVEGHRFHHVSTDEVYGTLSPTDPAFTEDTAYAPNSPYSASKAASDHLVRAYHHTYGL
NVTTSNCSNNYGPFHFPEKLIPLVITNILHDKALPIYGDGQQIRDWLYVEDHAYGIDLVL
QNGRVGENYNIGGDNEWANIDIVKTISKLVEQEFVKNKALATRFPAAKAAMAQNTESLIT
YVKDRLGHDRRYAIDATKTNNELNYKPKESFETGIAKTVAWYLNNEDWWQSVMDGSYQNW
IAEQYS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattattagttacaggtggtgcaggttttattggcgctaattttgtccattat
tggatggaaaaatattcagccgataaagttgtggtacttgacgcactaacttacgcgggt
aatatcgctaacttagacagtgtaaaggaccatgctaactttacttttgtgcacggtaat
atttgtgaccaagcgctaattgaaagattactggttgaacatggtattgataccttagtg
cattttgcagctgagtcgcatgttgaccgttcaattactggtcctgatgcgtttattgaa
actaatatcatgggtacttatagcttacttaaagcggctaaaaaagtgtggttagacggc
gagagtattgttgaagggcataggtttcatcatgtttctacagatgaagtgtatggtacg
ctttcacctaccgaccctgcttttactgaagatacagcttacgcgcctaattctccttat
tcggcgagtaaagcggctagtgatcatttagtgcgtgcttatcaccatacttatggttta
aatgttaccaccagtaattgttcaaataactatgggccgtttcattttccagaaaagctt
attcctttagttattactaatattttgcatgataaagccttgccaatatacggtgatggt
caacaaattcgtgactggttatacgttgaagaccatgcttacggcattgacttagtatta
caaaatggccgcgtgggtgaaaattacaatattggtggcgacaatgaatgggcaaatatt
gatattgttaaaactatttcaaaattggttgaacaagaatttgttaaaaacaaagcttta
gctacgcgttttcctgcggctaaagcggcaatggcgcaaaacactgagtcacttattacg
tacgtgaaagaccgacttggtcacgaccgtcgttatgccattgacgcgactaaaactaac
aatgagttaaactataaacctaaagagtcatttgaaacgggcattgctaaaaccgttgct
tggtatttgaataatgaagattggtggcaaagtgtaatggatggttcataccaaaattgg
atagctgagcaatattcataa
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