Cognaticolwellia beringensis: B5D82_03055
Help
Entry
B5D82_03055 CDS
T05628
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cber
Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cber03016
]
B5D82_03055
Enzymes [BR:
cber01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
B5D82_03055
Transfer RNA biogenesis [BR:
cber03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B5D82_03055
Prokaryotic type
B5D82_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
BCSC_C
Motif
Other DBs
NCBI-ProteinID:
ASP49854
UniProt:
A0A222GEQ3
LinkDB
All DBs
Position
732884..734110
Genome browser
AA seq
408 aa
AA seq
DB search
MKTENNSNLTLTAEPINPIKEKEKVTEKDQDKKPEQSPSPLPAFSYLYGKPKSTGLLRRH
RSDFKVCEQIPFEPCGEGEHLFIHIRKTGANTAFVAKQLAQYFSVKESLVSYAGLKDRFA
VTEQWFGVHVPGKQSYDLSDLNIEGVEVLSSKRHNKKLRIGGLDGNRFEITLRDVTDIDE
LVRRWHVISNFGVPNYFGEQRFGINGGNIEKALGLFSGQKVKDKKKRGMYLSAARSLIFN
EMISQRIEQQTFDNLVSGDVLMLAGTQSVFLADVIDESLTSRLAEHDLDITAPMWGAGEL
MTTGDARVFEQSIADEQQAFCEGLPRFGLKQERRRIRLTIKDTDIKVDNNVVTLSFFLPA
GAYATTIMRELIDYTDMTERVAVGSSPDSNNTVEVGTETKNINAELKN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgaaaataacagcaacttaacattaaccgctgaaccgataaatccaattaaa
gaaaaagaaaaagtcacagaaaaagaccaagacaaaaagcctgagcaaagcccgtcaccc
ttaccagcgttctcttatttatatggtaaaccaaaatctaccggtttgttgcgtcgtcac
cgttcagactttaaagtctgtgaacaaataccctttgaaccctgtggtgaaggtgagcat
ctgttcattcatattcgaaaaaccggtgctaataccgcttttgttgccaagcaactcgcg
caatacttttctgttaaagagtctttagtttcttatgcgggtttgaaagatcgcttcgcc
gtgactgaacaatggtttggtgtgcatgttcccggcaaacaaagttatgacttaagtgac
ctaaatatcgaaggtgtagaggtgctatcgtctaaacgccataacaaaaagctgcgcatt
ggtggtttagacggtaatcgttttgaaattaccttacgtgatgtcactgatattgacgaa
ctcgttaggcgttggcacgtgatcagtaattttggcgtaccgaactactttggtgaacag
cgttttggcattaatggtggtaacatcgaaaaagccttaggtttgttctcaggccaaaaa
gttaaagacaagaaaaagcgcggtatgtatttatctgccgcacggtcattaattttcaat
gaaatgatcagccaacgtatcgaacaacaaacattcgacaacttagtcagtggtgatgtg
ttgatgttggcgggtacccagtctgtatttctcgctgatgttattgatgaaagtttaaca
agtcgcttagccgaacacgacttggatattactgcgccaatgtggggcgcgggcgaatta
atgaccactggcgatgcacgcgtttttgagcaaagtattgccgatgaacaacaagcattt
tgcgaaggtttgccccgctttggtttaaaacaagaacgccgccgtattcggttaactatt
aaagacactgacattaaagtagataacaatgttgtgaccttgtcatttttcttaccggct
ggcgcctatgccaccaccattatgcgtgagttaatcgattatacagatatgacagagcgc
gttgctgttggctcaagcccggattcaaataatacagtggaagttggtactgaaacaaaa
aacatcaatgcggagctaaaaaactga
DBGET
integrated database retrieval system
