Cognaticolwellia beringensis: B5D82_03475
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Entry
B5D82_03475 CDS
T05628
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03420
Nucleotide excision repair
cber03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5D82_03475
03430 Mismatch repair
B5D82_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_03475
Enzymes [BR:
cber01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5D82_03475
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5D82_03475
MMR (mismatch excision repair)
Other MMR factors
B5D82_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
AAA_11
Chordopox_A30L
Osmo_CC
Motif
Other DBs
NCBI-ProteinID:
ASP46921
UniProt:
A0A222G541
LinkDB
All DBs
Position
836045..838123
Genome browser
AA seq
692 aa
AA seq
DB search
MPVISITDEDIKYAESILLKAGQKFDDERIEFLKDLNTLDLQAVPGSGKTTILLAKLLIF
ERYMPFKSGSGVLVISHTNAAINEIKNRIGPYCPKLFSYPNFVGTIQGFVNEFLAKPYFK
QSFGNDIIKICDQAYAQQIKNKLTFDLFGQRESFKKVKYIFSCNDSKIFNYRFSQEPKSR
DLVSTINGSNLKINKPKPKSINYQDYSDEEKSDILDYLFKLKWKVLAEGYLHFDDAYALA
YKYLYAQPQIINIIQRRFSYVFVDEMQDMDEHQYQILEMLFFGNEICKSVYQRVGDKNQA
IFNGDIKLDEIWIDRKIVKKITGSHRLSPQIASLTNQFSLTKSNIIGLNPDSNIKPLILI
YTTENKEKVIEFYTSIINELTEKGILPSSSSKTIAAVAWVTGKKDKEIQITLPSYYPSYS
REQEKPKSEYNCLAQYLICFEQIDSSLKPIAFNIKSAIMKSLRIVNIKGDDGKFFKESTF
RKLLLEKSLLNEKEVTFEKNIYMWSINVMRGNHKDVLGELQVYIISIFNELFPEYIPEHN
FLYDHYLPNINESATPELTNSNILFNTVHGVKGNTHLATLYLESFYYGEYESTLLSEVFN
GVCSMDFINNIEKKINQLNFEIVELNKKGKKGAIKRQDEISTLNTKMDNIKRYSKMLYVG
FSRPTHLLAFAVEETRFNALTINEDVWDVTYV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaattagtattactgatgaggatattaaatacgctgaatctattttattaaaa
gctggacaaaaattcgatgatgaacgaattgagttcttaaaagacttaaatacgcttgat
ttacaggccgtcccaggcagtggaaagacaacgattctcttagcaaaactattgattttt
gaacgttatatgcctttcaaaagcggctctggtgtattagtaatatctcatacaaatgcg
gcaattaatgaaataaaaaaccgtattggtccttactgtccaaaattattttcttatcca
aattttgttggaacaattcaaggctttgttaatgagtttttagctaagccttattttaag
cagagctttggaaatgatattattaaaatatgtgaccaagcatatgcgcagcaaataaaa
aacaaattaactttcgatttatttggtcaaagagagtcgttcaaaaaagttaaatatatt
ttctcctgtaacgactcaaagatatttaattatcgtttttcgcaagaacccaagagtaga
gatttagtcagcacaataaatggttctaatttaaaaataaataagccgaaaccaaagtcc
ataaactatcaagattattcagatgaagaaaagtcagatattttagattatttatttaaa
ttaaagtggaaagtccttgccgaaggttatctacactttgatgatgcttatgctttagct
tataaatacttatatgctcaaccacagataatcaatattattcaacggcgtttttcttat
gtatttgttgatgaaatgcaagatatggatgaacaccaataccaaattttagaaatgttg
ttttttggtaacgagatttgtaaatctgtataccaacgtgtcggcgataaaaaccaggcg
atttttaatggtgatattaaattagatgagatatggatagatcgaaaaatagtaaaaaaa
atcactggcagccatcgtttatcacctcaaatcgctagcctcacaaatcaattcagttta
acgaaatcgaatataataggcttaaatccagatagtaatataaaaccactgatacttatt
tataccactgaaaataaagaaaaagtaatcgagttctacacatcgataattaatgagtta
actgagaaaggcatactcccctcttcctcttcaaagacaatagcagctgtagcatgggtt
acagggaagaaagataaagaaatacaaatcacgctacctagttattatccaagctatagc
cgtgaacaagaaaaacctaaaagtgagtataactgtttagcgcaatatttaatctgtttt
gaacaaattgatagcagtttaaaaccaattgctttcaacattaaaagtgcaattatgaaa
tcgcttagaatagtgaatattaagggtgatgatggaaaattctttaaagaatcgactttt
agaaagttgctgctagaaaagtcactattaaatgaaaaagaggtaacatttgaaaagaat
atttacatgtggtcaatcaacgtaatgaggggaaaccacaaggatgtattgggtgaacta
caagtttatattatttcaattttcaatgaattattcccagaatacattccagaacataat
tttttatatgatcactatttaccgaatattaacgagtccgctacgcctgaattaacaaat
agtaatattttattcaacacagtgcatggtgtaaaagggaatacgcatttagcaacttta
tatttagaatccttttattatggtgagtatgaatctactttattaagtgaagtatttaat
ggtgtatgtagtatggattttattaataacattgaaaaaaaaattaaccaactaaatttt
gaaattgttgaattgaataaaaaaggtaaaaaaggagctataaaacggcaagatgaaatt
agcacgttaaatacaaaaatggataatataaaaagatactctaaaatgttgtacgttggc
ttttctagaccaacacatttattagcctttgctgtagaagaaactagatttaatgcatta
actattaatgaagatgtttgggatgtaacttatgtttaa
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