Cognaticolwellia beringensis: B5D82_06650
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Entry
B5D82_06650 CDS
T05628
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00300
Lysine biosynthesis
cber00470
D-Amino acid metabolism
cber01100
Metabolic pathways
cber01110
Biosynthesis of secondary metabolites
cber01120
Microbial metabolism in diverse environments
cber01230
Biosynthesis of amino acids
Module
cber_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5D82_06650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B5D82_06650
Enzymes [BR:
cber01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B5D82_06650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Nudix_hydro
DUF6263
EccE
Motif
Other DBs
NCBI-ProteinID:
ASP49921
UniProt:
A0A222GDP7
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All DBs
Position
complement(1581139..1582383)
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AA seq
414 aa
AA seq
DB search
MLNRPNWLRPALLEPLLAHQERLNNRNDVEQDEDGYFLYDLDYLEQHLSSLMQQDVIKLW
FAVKANPLSRVIKTLAQQGFNFDVASQGELTQVLAQDVPADRILNTGPAKSKRQIKAFLE
QGVRTFVVESLNQLQWLNDAASELSCQPQVLLRVQLQWEEGEKNPLGGNEVTAFGLSCQA
WQTIKVSDFPALNINGLHIFQWGNMLSNERMFELWSQMVSPLLSLAEQLGMTLEVLDLGG
GLGVDYLQTGKGLRWEKIVADLAKIKARAGVSELWLELGRFAVAEMGYYVTSVVDRKENF
QHQQLVLAGGINHLIRPAITEQPFPVTMIRESAASPVYFDLHGPLCTSLDKLGTLAIASD
VAVDDQLIFGLAGAYGFTESMPFFLCHQIAAEYVLQQGKIEQVRSAQPASWYLR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatagaccaaactggcttaggcctgcattacttgaaccgctattggcgcatcag
gaacgactaaataatcgtaatgacgttgaacaagatgaagacggttattttctttatgat
ctcgactatcttgagcaacatttatcgagtttgatgcaacaagacgtgattaaactttgg
tttgctgtcaaggcaaatcccttgtcaagggtgatcaaaactttagcgcagcaaggtttt
aattttgatgttgcaagtcaaggcgagctaacacaagtattagcacaagatgttccagcc
gatcgtattcttaatactggcccagctaaatcgaagcggcaaataaaagcctttctagag
caaggcgtgcgcacttttgtggtggagagtttgaaccagttacaatggcttaatgacgcc
gctagcgagttatcttgccaacctcaagtgttactgcgcgtgcagttgcaatgggaggag
ggagagaaaaaccctttagggggtaacgaagttactgcttttggcttatcttgccaagcg
tggcaaacgataaaagtaagtgatttcccagcattaaatatcaatggtctacatattttc
caatggggaaacatgctcagcaatgagcgtatgtttgagctttggtcacaaatggtatcg
cctttgttgtcattggcggaacaattaggaatgaccttagaggtattagatttaggtggc
ggtttaggtgttgattacctgcaaactggaaaagggttacgatgggaaaagattgttgcc
gacttagccaaaataaaagcgcgggccggcgttagcgagctctggttagagcttggccga
tttgcggtggctgaaatggggtattacgtaacctcagttgttgaccgtaaagaaaatttt
caacaccaacaattggtgctagcggggggtattaatcatttaattcgacctgccattaca
gaacagccatttccagtgacgatgattagagaatcagcagcaagccctgtgtattttgat
ctccatgggccattgtgtaccagtttagataaattgggcaccttggcgatagccagtgat
gttgcagttgatgatcaattaatatttggtttagcgggtgcttatggttttaccgaaagt
atgccattttttctttgtcatcaaatcgcggcagaatatgttctgcagcaaggaaaaatt
gaacaagtacgatcagctcagcctgcttcatggtatttacgctaa
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