Cognaticolwellia beringensis: B5D82_08600
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Entry
B5D82_08600 CDS
T05628
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00300
Lysine biosynthesis
cber00470
D-Amino acid metabolism
cber01100
Metabolic pathways
cber01110
Biosynthesis of secondary metabolites
cber01120
Microbial metabolism in diverse environments
cber01230
Biosynthesis of amino acids
Module
cber_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5D82_08600 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B5D82_08600 (lysA)
Enzymes [BR:
cber01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B5D82_08600 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASP47808
UniProt:
A0A222G7E5
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All DBs
Position
2034782..2036032
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AA seq
416 aa
AA seq
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MDFFNRKQHSLFAEQCPVAELAKQYGTPLYIYSRATIERHWHAFDQAAGERPHLVCYAVK
ANSNIAVLNVMARLGSGFDIVSKGELMRVIEAGGDPKKVVFSGVGKTSEEIAFALNLGIY
CFNVESAAELERIQSVAQGLNKVAPISLRVNPDVDAGTHPYISTGLKENKFGISIEQAPE
LYQYASTLSHINIQGVDCHIGSQLTEILPFLDALDRVLKLVDELAEQGIALSHIDVGGGL
GVCYDDEQPPHPKEYAEAIAQKLTGRDLTLIYEPGRAVMANAGILVTEVEYIKVSEDRNF
AIVDAAMNDLIRPALYQAWQAIIPVEQRDDVASAQYDVVGPICETGDFLGKDRALAISAG
DLLAIRSAGAYGFTMSSNYNSRPRAAEVMVDGSESYLVRKRETFSQLWQGESLLPL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggacttttttaatcgtaaacaacattcattattcgccgagcaatgtccggtcgctgag
ttagcaaagcaatacggtacgccgctttatatatattcacgcgccaccattgagcgccat
tggcatgcttttgatcaagcggctggagagcgaccacaccttgtttgttatgctgttaag
gcaaacagtaatatagcggtattgaatgtaatggcacgcttaggttccggctttgatatt
gtttcaaaaggcgagttgatgcgcgtgattgaagcgggcggcgatccgaaaaaagtggtg
ttttcaggtgtagggaaaacgtcagaggaaattgcattcgcattaaaccttggtatttac
tgctttaatgttgagtcagctgctgaattagaacgcatacaatctgttgcacaagggctg
aataaagttgcgcctatttcattgcgggtaaaccctgatgtggatgcgggcactcaccct
tatatttcaactggcttaaaagaaaataaatttggtattagtattgaacaggcgcctgag
ctctatcaatatgcttcgacattatcgcatatcaatattcaaggcgttgactgccatata
ggttcacagctcaccgaaattttaccgtttttagatgcgcttgatcgagtgttaaagtta
gtcgatgaattagctgaacaaggtattgcgctctcgcatattgatgtcggcggtggttta
ggtgtttgttacgatgacgagcaaccgcctcaccctaaagaatacgctgaagcaattgca
caaaagctaaccggtcgcgatttaacgcttatttatgaaccaggccgggctgtgatggcc
aatgcaggtattttggtgactgaagttgaatatatcaaagtcagtgaagaccgaaatttt
gccattgttgatgcggcaatgaatgatttgataagacctgctttatatcaagcttggcaa
gccattattcctgttgagcaacgtgatgatgttgcgagtgcgcaatacgatgtggttggt
cccatatgtgaaaccggtgattttctaggtaaagaccgagcgttggcaattagcgcaggc
gatttgcttgctatacgcagtgccggtgcttatggttttactatgagttcaaattacaat
agtcggccacgtgcggctgaagttatggttgacggcagcgagagctatttagtcagaaaa
cgcgaaaccttcagccagttgtggcaaggtgaaagcttgttacctttatag
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