Cognaticolwellia beringensis: B5D82_08620
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Entry
B5D82_08620 CDS
T05628
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03420
Nucleotide excision repair
cber03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5D82_08620
03430 Mismatch repair
B5D82_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_08620
Enzymes [BR:
cber01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5D82_08620
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5D82_08620
MMR (mismatch excision repair)
Other MMR factors
B5D82_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ASP47811
UniProt:
A0A222G7M2
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All DBs
Position
2038487..2040661
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSELLESLNDKQRDVVAAPLQNMLVLAGAGSGKTRVLVQRIAWLMKVEQASPHSILAV
TFTNKAAAEMRARVEQTVDGNVHGMWVGTFHGLAHRLLRMHFQEAKLPQSFQVLDSDDQL
RMVKRIVRSLELDEKRWPPKQFLWYINGKKDEGLRPHHIDSQHDVTEETFVKVYRVYQDT
CDRAGLVDFAELLLRAHELWLNNPELLAHYQQRFRHVLVDEFQDTNAIQYAWLNLLGKKS
GNVMIVGDDDQSIYGWRGAKIENIQRFLQDFDGAKTIKLEQNYRSTANILNAANQLIANN
SNRLGKDLWTEDDAGEKISIYTAFNEIDEARFIAGRISDWKNKNGSLDDVAILYRSNAQS
RLMEEALIQAKLPYRIYGGLRFFERQEIKDALAYLRLLNNRDDDAAFERVINTPTRGIGN
QTLSLVRDGARSLECTLWQACQHMVQNKELKGRSAKVIQQFINVIDQLEDDSSHLNLDQQ
ANHVIQHSGLKAMYQAEKGERAEARIENLNELVTACQTFEVDPELEEEQSPLTSFLTHAA
LESGESQADDHEPAVQLMTMHSAKGLEFPLVFIAGLEEGMFPSQQSVEDISRLEEERRLC
YVGMTRAMQKLYLCHAESRRLYGQEKNHKASRFLRELPEACTEEIRLQSQVKKPITTGKF
SSALTLETFGNSGFKLGQNVRHKKFGDGVVLNYEGSGPQSRIQVNFADVGCKWLVVSYAN
LETL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctgaattacttgaatcgttgaacgataaacaacgagatgttgttgctgcg
ccactacaaaatatgttggtgcttgcaggcgctggaagtggtaaaacgcgagttttagtg
cagcgtattgcttggctaatgaaggttgagcaggcatcacctcatagtattttagcggtt
acttttaccaataaagccgcggctgaaatgcgtgcacgcgttgaacaaaccgtagatggt
aatgtgcatggcatgtgggtaggtactttccatggcttagcgcatcgattattacgcatg
cacttccaagaagctaaattgccacaaagctttcaagtactcgattctgatgaccaactt
cggatggttaagcgtattgttcgctctttagagttggatgaaaaacgttggccacccaaa
caatttctttggtatatcaatggtaaaaaagatgaaggcttacggccacatcatattgat
agccaacatgatgttaccgaagaaacctttgttaaagtttatcgtgtctatcaagatacc
tgcgaccgcgcaggtttagtcgacttcgctgagttattacttcgagctcatgagctttgg
ctaaataaccctgagttattagcgcattatcaacaacgctttaggcatgtgttagtggat
gagtttcaagatactaacgctatacaatatgcttggttaaacttgttaggcaagaaaagc
ggtaatgtcatgattgttggtgacgacgatcaatctatttatggctggcgtggcgcaaaa
attgaaaatattcagcgttttttgcaagattttgacggtgcaaaaacgattaaacttgag
caaaactatcgctcaactgccaacatccttaatgcggctaatcaactgattgctaacaat
agtaatcgcctcggtaaagatttatggaccgaagatgatgcgggcgaaaaaatatctatc
tatactgcattcaatgaaatagatgaagcacgtttcattgccgggcggatcagtgactgg
aaaaataaaaatggctcactagatgatgtcgccattttatatcgcagcaatgcgcaatca
cgcttaatggaagaagcgttgattcaagcgaaattaccttaccgaatttatggcggttta
cgattttttgaacgccaagaaatcaaagatgcgcttgcttatttacgtttactgaataac
cgtgatgacgacgcggcatttgagcgggtaattaataccccaacacgtggtattggcaat
caaacgcttagcctagttcgcgatggggctagaagcttggaatgtactttgtggcaagca
tgtcagcatatggtgcagaataaggaacttaaaggtcgcagtgccaaggttattcagcaa
tttataaatgttattgatcaattagaagacgactcaagtcatttgaatcttgaccaacaa
gcaaaccatgttattcagcattcaggtttgaaagctatgtatcaagcggaaaaaggtgaa
cgtgctgaagcccgtattgaaaacttaaatgagctagtcacggcttgtcaaacatttgaa
gtagatcctgagcttgaagaagaacaaagcccactaacctcatttttaacccatgcagcg
cttgagtctggtgagtcacaagccgatgatcatgagcctgcggtgcaattaatgaccatg
cactcggctaaaggtttagagtttccattagtgtttattgccggcttagaagaaggtatg
tttccctcgcagcagtcggttgaagatatcagtcgcttagaagaggaacgccgtttatgt
tatgtcggtatgactcgggcaatgcaaaaattatatttgtgccatgccgaaagccgtcga
ctatatggccaggaaaaaaatcataaggcgagccgctttttgagggagttaccagaagct
tgtacagaagaaattcgcctacaaagtcaggtgaaaaagccaataacaacagggaaattc
tcatcagcccttactttagaaacctttggtaattcgggttttaaattgggccaaaatgtt
cgccataaaaagtttggtgatggtgtggttttaaactacgaaggtagtggcccacaaagt
cgcattcaagttaacttcgctgatgtcggttgtaaatggctagtagtttcttatgctaac
ttggaaacattgtaa
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