Cognaticolwellia beringensis: B5D82_11985
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Entry
B5D82_11985 CDS
T05628
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5D82_11985 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_11985 (recO)
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B5D82_11985 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B5D82_11985 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
UPF0203
Motif
Other DBs
NCBI-ProteinID:
ASP48424
UniProt:
A0A222GAM6
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All DBs
Position
2810959..2811645
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AA seq
228 aa
AA seq
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MQEITQSAFVLHTRPYRENQLLVDLLTEHDGKLAALSYVGHSTKSSRKALLQPFLPINVT
LKGQQSLKSLIRVEPIGKSFLLKKNALFSAFYINELLVKLLGENIACDELFQQYIICLKS
LTEASNIEICLREFELTLMEELGISFDFSLVFEHSAEGFYYLPDEGFIPAYTKLKQPCYD
RLHLQAIAQQDLSTPAVLITFKNLMRQVINHLLNGVPLNSRKLFSKKA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaattacccagtcagcttttgttcttcatactcgaccttatcgagaaaatcag
ctgttagttgatttgttaactgagcacgatggtaagctggcggcgttaagttatgtcggc
cactcaacaaaatcgagtcgtaaggcgttactacagccttttttaccgattaacgttacc
ttaaaggggcagcaaagcctaaaaagcttgattcgtgtagagccgattggaaaatctttt
cttttaaaaaaaaatgctttattcagtgcgttttatattaatgaattattggttaaatta
cttggcgaaaatattgcctgtgacgagctttttcaacaatatataatttgcttaaagtct
ttaactgaagcgagtaatattgaaatttgtttacgtgaatttgaattgacgctaatggaa
gagttgggtatttcttttgatttttcattagtatttgagcatagtgctgagggcttctat
taccttccagatgaaggctttatcccagcctatacaaagttaaagcagccttgttatgac
cgactgcatctgcaagctattgcacagcaggacttatcgacgccagcagtacttattaca
tttaaaaatttgatgagacaggtcattaatcacttactcaatggcgtacctctgaatagc
cgaaaattatttagtaagaaagcataa
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