Cognaticolwellia beringensis: B5D82_12010
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Entry
B5D82_12010 CDS
T05628
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cber
Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cber03009
]
B5D82_12010
Enzymes [BR:
cber01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B5D82_12010
Ribosome biogenesis [BR:
cber03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B5D82_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_11
TRAM
Methyltransf_15
Methyltransf_4
Methyltransf_23
UPF0020
Ribosomal_L22
Pox_A12
Motif
Other DBs
NCBI-ProteinID:
ASP48428
UniProt:
A0A222G949
LinkDB
All DBs
Position
2816183..2817499
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AA seq
438 aa
AA seq
DB search
MANFFKASPKKTQVQQQLTVHVSHLDQQGCGVAFQGKKPIFIEGALPNETLEVKLYEQKS
KFSKAKLLQIITASPNRAEVKCRHYFQCGGCNLQHMDYQSQLSYKQDKITKLFSRQALNE
PMPWQNPIVSEPWHYRRKARIGVQYNKRGEPIVGFRQRESSHLTEIKSCPVLVEAFNNIF
PELKDILAKVSGKNAIGHIEIIAANVNVVLVRQLVKLTAKDKQLWMNFASKNDWLVYFDD
GKSVTPLMEDKTLSYTLTDTIKIEFSVDSFIQVNHLVNNKMVEQAQAWLMLNESDVVLDL
FCGLGNFSLPMAQKVSTVVGIEGIASMVDKAQANAQKNGISNCQFYQADLNSDWQNELWA
QQKYTKILLDPARAGAYQALTQLLTFKVSKILYVSCDPASLARDAKLLIDHGYKIEKIAL
MDMFSQTKHVETMVMFSL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttttttaaagcaagccccaaaaaaacgcaagttcaacaacaattgactgtt
cacgttagtcaccttgatcaacaaggctgcggcgtcgcttttcagggtaaaaaaccaatt
ttcattgaaggtgcgctgcctaatgaaacattagaagttaagctgtatgagcaaaaaagt
aagttctcaaaagcaaagttattacaaattataacggctagtcctaatcgcgcagaagtt
aagtgccgtcattattttcagtgtggtggttgtaacttacaacacatggactatcagtcg
cagctaagttataagcaagataaaataacgaaattattttctcgccaagcgctcaatgaa
cctatgccgtggcaaaaccctattgtgagtgaaccatggcactatcgccgcaaagcaaga
attggcgtgcaatataataaacgtggagaacccattgttggtttccgccagcgtgagagt
agtcatttaactgaaattaaatcttgtccagtacttgttgaagcatttaataatatattt
cctgaactaaaagatattttagcaaaagtgtcagggaaaaatgcaatcggtcacattgag
attattgccgccaatgtcaatgtggttttggtgcgccaattagttaaactgactgcaaaa
gataaacagctttggatgaactttgctagtaaaaatgactggttagtttactttgacgac
ggtaaaagcgtgactcctttgatggaagataaaacattatcttatacattaactgataca
ataaaaattgaattctctgtcgatagctttatccaagtaaatcatctcgtcaataataaa
atggttgagcaagcccaagcatggcttatgctaaatgaaagcgatgttgtactagatcta
ttttgtggtttaggtaattttagtttaccgatggctcaaaaagtatcgactgttgttggc
atcgagggtattgcgtctatggtcgataaggcacaagcaaatgcccaaaaaaatggcata
agtaattgtcaattttaccaagctgatttaaacagtgattggcaaaatgaactttgggcg
cagcagaaatataccaagatactactggatcccgctagggctggagcgtatcaagcgcta
acgcaattattgacttttaaagttagcaagatactttatgttagctgcgatcctgcatcc
ttggctcgtgatgcaaaattgcttattgatcatggttataaaatagaaaaaattgcctta
atggacatgttttcgcaaacaaagcatgttgaaactatggtaatgtttagcttataa
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