Cognaticolwellia beringensis: B5D82_12310
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Entry
B5D82_12310 CDS
T05628
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5D82_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cber03000
]
B5D82_12310
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_12310
Enzymes [BR:
cber01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B5D82_12310
Transcription factors [BR:
cber03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B5D82_12310
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B5D82_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
OGG_N
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ASP48479
UniProt:
A0A222G9B9
LinkDB
All DBs
Position
complement(2896648..2898084)
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AA seq
478 aa
AA seq
DB search
MFSIEVCENARLSRDARFDGKFFTAVITTGIFCRPICPARPPKPENVTYYESAELAQQSG
FRPCKRCFPQLAPNLPLPRKIKQITQTYYENNYSLQKCAEQLDISERQIRRLFLQYYGLP
PSEFFHQQRLLLAHKLLISTSLSITDVAFAAGFNSIRRFNEVILQTYKTSPSKIRGNKKI
SSDMQVTILLPYKAPFDWPLMLNFFRSRKMSNIEDISTEHYFRTVELENCRGWIKVTHHQ
DKSALNLTVKLTDYSYLHQIIARVRRMFDLDADMQLIHQHLITHPKLASVIEQFPGLRLP
GCWDIFEFSIRAILGQQISVKGATTLAQRIAEKYGETAVDIEQPENISVSKYFPSVAALI
NIDYQEIGLTRSRIATLQTWVAYFQEHDTVFAKGLTIEELEVKLTELKGIGPWTVNYIGM
RGLSDPDAFPSADLGIIKALTIDEVKPKNKDILALAEKWQPWRAYAAIYLWQSLATKT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtatagaggtttgcgaaaatgcacgcttaagccgcgatgctcgctttgatggc
aagttttttaccgccgtgatcacgacaggtattttctgtcgacctatttgtcctgccaga
ccaccaaaaccagaaaatgttacctattatgagagtgcagaactcgcacaacagtcaggt
tttcgcccatgcaagcgctgttttccgcaacttgcgccaaatttgccattacctagaaag
attaagcaaataacgcaaacatattacgaaaataattacagtttacagaagtgtgctgag
caacttgatatcagcgagagacaaattcgtcgtttatttttgcaatattacggtttaccg
ccgagtgaatttttccatcagcaacgtttattacttgcccacaaactgcttatttcaaca
tctttaagtattactgacgttgcttttgctgcgggttttaatagcatacgtcgttttaat
gaagttattttgcaaacctataaaacttcgccaagtaaaatcagaggcaataaaaaaata
tcatctgatatgcaagtaactattctattgccgtataaggcaccttttgattggccgtta
atgctaaattttttccgttcaagaaaaatgagcaacatagaagatattagcactgaacac
tattttcgtacggtcgaacttgaaaactgtcggggctggataaaagttacgcatcatcaa
gataaaagcgccttaaatttaacggttaagttaactgattatagttacctgcatcaaatt
atcgctcgtgttcgtcgcatgttcgacttagatgctgatatgcaattaattcatcaacac
ttaataacacacccaaaattagcgtcagttattgagcaatttcccggtttacgcttacct
ggctgttgggatatttttgagttttctattcgtgccatattaggccaacaaatatccgtt
aaaggtgcaacaaccttggcgcaacgtatagcggaaaaatatggcgagacagctgtcgat
attgaacaacctgaaaatatcagtgtttcaaagtactttccaagtgttgcagctctaatc
aatattgactatcaagagataggcttaacccgatctcgcattgccactttgcaaacttgg
gttgcctactttcaagagcatgacactgtatttgctaaaggcctaacgatagaagaatta
gaagttaaattaacagaacttaaaggtattgggccatggacagtaaactatattggcatg
aggggtttaagcgatccagatgcgtttcctagtgccgatttaggtattataaaagcgtta
acgattgatgaagtcaaaccaaaaaacaaagacatattagcgttagccgaaaaatggcaa
ccttggcgtgcctacgctgctatatatctatggcaatcgttagccactaaaacctaa
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