Cognaticolwellia beringensis: B5D82_15430
Help
Entry
B5D82_15430 CDS
T05628
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5D82_15430 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_15430 (recD)
Enzymes [BR:
cber01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B5D82_15430 (recD)
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5D82_15430 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
UvrD-helicase
SH3_13
Helicase_RecD
UvrD_C
DEAD
SLFN-g3_helicase
AAA_22
PhoH
Head_binding
AAA_16
ResIII
DUF87
nSTAND3
FtsK_SpoIIIE
Zeta_toxin
AAA
Motif
Other DBs
NCBI-ProteinID:
ASP49039
UniProt:
A0A222GAX7
LinkDB
All DBs
Position
3672922..3675012
Genome browser
AA seq
696 aa
AA seq
DB search
MSELVISSESKVTCQKESIYASFQHAARQLGGLVAVDYFFAKEISQCLEPSGVSVSSQVT
EQQQWFHLLVALSASLRDGHSCLPLAQVAGKRLFTDPINQSETSTKGFLFSDLDTLTALM
AALPLADSDKIAPSEQQPIVFSHNRLYLRRYYQFEQELKQVVRERRVVSTKLVESLSNSN
ETFEDVGNIRSIITTLFPGLASLSDKQSDTQNSEIDWQAVAVANAINKDFAIIAGGPGTG
KTYTVTKLLAALIMLARANIESQKESQFTAPKISLVAPTGKAAQRLSESITSAVKAFRGT
INDEVLDLIPEQAKTIHRLLGVIPEQVNFRHHQDNLLDIDILLIDEVSMVDLPMMARIFR
ALPINTKVILLGDADQLPSVAIGSVLADFAPRPHLGYSALNHQYLAQVTGYQSLTKDQTA
DANSAQYSAADCVTFLMKSRRFDGEGGIGRIANYVINGQYQESWQLLKQSEVLDSSLQDE
SLSNDKQLTLLPGNVETWLTPLVEQYYLGLSQCSKVEDAFALLAKFRILSSTRKGPQGVE
SLNALVIDILRNKGVIPFNRFESNTSLYASQPIMINENDYRLGVYNGDIGVLWRNSQGHL
MAVFENAQGGYDWILPSRLPKFETVYAMTIHKTQGSEFEHVAMVLPEQKDNRLLSRELLY
TGITRAKLKLSIASSQSVWQSGVSQQVKRHSGLAID
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacttgttattagtagcgaaagtaaggtgacctgccaaaaagaaagtatttat
gcctcgttccagcatgccgcacgtcaattaggtggactggtggctgtagactactttttc
gcgaaagaaattagccaatgtcttgaaccttctggagttagcgtctctagccaagtgact
gaacagcagcaatggtttcacttattagtagccttaagtgcaagcttgcgagacggccac
agttgtttgccactggcgcaagtcgcgggcaagcgcttatttactgaccctattaatcaa
agcgaaacgagcactaaaggctttttattttctgatctagatacactcaccgcgctgatg
gcagcactacccttagcggactcggataaaatagccccctctgagcagcaaccgatagta
ttcagtcataaccggttgtacttgcgccgttactatcaatttgaacaagaattaaagcag
gttgtgcgcgaacgacgagttgttagtaccaagttagttgagtcattgagtaacagtaat
gaaacatttgaagatgttggcaatattagaagcattataacgaccttgtttccaggttta
gcgtcactaagcgataaacaaagcgatacacaaaatagcgaaattgattggcaagctgtt
gccgttgccaacgccattaataaagattttgccattattgcgggtggaccaggtacaggt
aaaacctacaccgtaactaaactgctggctgcgcttatcatgctagctcgcgcaaatatc
gaaagccaaaaggagagccagtttacggcaccaaaaatttccctagttgcgcctacaggt
aaagcggcgcagcgtttgtccgaatctatcaccagtgcggttaaagcgtttcgcggcact
atcaatgacgaagtattagatcttattcctgagcaagcaaaaaccatacatagattatta
ggcgttattcctgaacaggttaactttcgccatcaccaagataatttactcgatatagat
attctccttatcgatgaagtgtcaatggtcgacttacctatgatggcgagaatttttcgg
gctttgccgatcaacactaaagtgattttactcggtgatgccgaccaattaccgtcagtg
gcgattggcagtgttttagctgattttgcgccacgtcctcacctaggttatagcgctttg
aaccatcaatatttagcacaagtaacggggtatcagtcgcttactaaagatcaaactgcc
gatgcaaattccgcacaatacagcgctgccgattgtgtaacttttctaatgaaaagtcgt
cgatttgatggggaaggtggcataggccgaatcgcaaattatgtaatcaatggtcaatat
caagaaagttggcagttattaaagcaaagtgaagtacttgatagttctttgcaagacgaa
agccttagcaacgacaaacaattaacattattaccaggtaacgttgaaacttggctaaca
ccacttgttgagcagtattacttgggcttgtctcaatgtagcaaggttgaagatgctttc
gcgttattggcaaagtttagaattttatcgtctactcgcaaaggcccacaaggggttgaa
agcctaaatgctttagttattgatattttgcgtaacaaaggtgttattccttttaaccgt
tttgagtcaaatacaagcttgtacgccagtcagccgatcatgatcaacgaaaatgactac
cgtttaggcgtttataatggcgatattggcgtactttggcgtaatagccaagggcattta
atggcggtatttgaaaatgcacagggcggttacgactggatcttaccctcgcgtttacct
aaatttgaaacagtttacgcgatgaccatccataaaacccaaggtagcgagtttgaacat
gtcgctatggtgttgccagagcaaaaagacaatagattattgtcgcgtgaattattatat
actggcatcacccgcgcgaagctaaagttgagcatcgccagtagtcagtctgtttggcaa
agtggcgtgagtcagcaagttaaacgtcattctgggctcgcaattgactag
DBGET
integrated database retrieval system
