Cognaticolwellia beringensis: B5D82_16370
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Entry
B5D82_16370 CDS
T05628
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03030
DNA replication
cber03430
Mismatch repair
cber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5D82_16370
03430 Mismatch repair
B5D82_16370
03440 Homologous recombination
B5D82_16370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cber03032
]
B5D82_16370
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_16370
Enzymes [BR:
cber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5D82_16370
DNA replication proteins [BR:
cber03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5D82_16370
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5D82_16370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASP49202
UniProt:
A0A222GBX3
LinkDB
All DBs
Position
3881028..3884582
Genome browser
AA seq
1184 aa
AA seq
DB search
MSESESTLTIAESDVIPARSDPKFIHLRIHSDYSMSDGLKKVKPIVARAAELNMPAMALT
DQTNLCGLVKYYHAAHGAGLKPIIGCDFWVKSEALEGELSRLVVLASSNIGYKNLTELIS
KAYLRGHIQGKAVLDRDWLIERAEGLILLSGGREGDVGKALLKGNREFVEEMLAFYLQYF
PNCYYIELIRTNRNDEENYIHLAVELAASHDLPVVATNEVMFLSPNDFDAHEIRVAIHDG
FTLDDKRRPKKYSKEQYLRTEEEMVELFADIPEALANSVEIAKRCNVTVRLGEYVLPDFP
TEGLSIEDYLVKVSEEGLQERLEFLFDKDAPDFAEKRKPYDERLAIELKVVNNMGFPGYF
LIVMEFIQWSKDNNIPVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPD
FDIDFCMDRRDEVIDHVAELYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISK
LIPPTPGMTLAKAFEEEPKLPEVYAQDSDVKDLIDMCRILEGTTRNAGKHAGGVVISPTT
ITDFAPLYCDEEGKNPVTQFDKNDVEDAGLVKFDFLGLRTLTILQWAIEMADAKLLKQGK
EPINLAGIDLEDKASFKVLLKSETTAVFQLESSGMKSLIAKLKPDCFEDIIALVALFRPG
PLQSGMVDNFIERKHGREAISYPDETWQHLDLKPILEPTYGIILYQEQVMQIAQVLAGYS
LGGADMLRRAMGKKKPEEMAKQRAGFEAGAIGRGVDGELAMKIFDLVEKFAGYGFNKSHS
AAYALVSYQTLWMKTHFPAPFMAAVMSADMDNTDKIVTLVDECSNMGLDLLPPDVNRGQY
KFTVNDDDQIIYGIGAVKGVGEGPIEAIIAARESDGEFIDLFDFCARVDLKKINKRVLEK
LIKSGAMDALGPNAKAGPHRAALFESLPEALKAAEQHAKAQAIGQNDLFGLINEEPEDNR
QVYKEVAKWPEQRWLDGEKETLGLYLTGHPINRYLNEIKRYATGRLVSLQPTNKDKTTVA
VGLVLAVRVLVNKRGRRWALVTLDDKSARMDIRLFPDDYDRFAELLISDAILVCSGQVSF
DDYSGGITMTARDIMTIADARENYVTSLDLQIDKNQLSGRFIEQFTQVLTPYKDGICPIR
VFYQRDEAKGMLELGVQWRVSPSDMLLYDLKTLLGEEQVELKFK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatctgagtcaacactaaccatcgctgaatccgatgtaattccagcccgaagt
gatccgaagtttattcatttaagaatacacagtgattattcaatgtcggacggtttaaag
aaagttaagccgattgttgcccgtgctgctgaattgaatatgccagccatggcattaact
gaccaaacaaatttatgtggtctagtaaaatattaccatgccgcacatggtgcaggttta
aaacccattatcggctgcgatttctgggttaaaagtgaggcacttgaaggtgagttgtct
cgcctcgttgtcttagctagcagcaacatagggtataaaaacttaacagaattaatttct
aaagcgtatttgcgcggacatattcagggcaaagcggtattagatagagattggttaatt
gagcgtgcagaaggcttaattttgctatcgggtggccgagaaggtgacgtaggcaaagcg
ctgttaaaaggtaatcgagagtttgttgaagaaatgctcgcgttttatctgcaatatttt
cctaattgttattacattgaactgattagaaccaaccgtaatgatgaagaaaactatatt
caccttgccgttgaacttgccgcgagtcatgacctgcctgtggttgccaccaatgaggtg
atgtttttaagtcctaatgactttgatgcccatgaaattcgtgtcgctatacatgacggt
tttaccctagatgataaacgccgtccgaaaaaatattctaaagaacaatacctacgaacc
gaagaggaaatggtcgagctttttgctgatattcccgaagcgctggctaactcagtagaa
atagcaaaacgctgtaatgttaccgtacgtttaggggaatatgtattacctgactttcct
actgaaggattgtcgattgaagactatttagtgaaagtctcagaagaaggtttacaggaa
aggttagagtttttatttgataaagacgctcctgactttgccgagaaacggaaaccttat
gatgaacgtttggccatcgagctcaaagttgtcaataatatgggcttccccggttacttt
ttgatcgtgatggaattcattcaatggagtaaagataataatattcctgtcggtcctggt
cgtggttcaggggcaggttcattggttgcttatgcacaaaaaattaccgatctagatccc
ctcgagtatgatttactttttgagcgatttctaaaccctgaacgtgtctcaatgcctgat
tttgatatcgatttttgtatggacagacgcgatgaagttattgatcacgttgctgagttg
tatggtcgtgacgcggtatctcaaatcattacctttggtaccatggccgcaaaagcggta
attcgagatgttggtcgagtgctcggccatccatacggttttgttgatcgtatttcaaaa
ttgatcccaccaacaccgggcatgacgttagcgaaagcatttgaagaagagccaaagtta
cctgaggtttatgcgcaagacagtgacgtaaaagatctgattgatatgtgccgaatttta
gaaggtacaactcgaaatgccggtaaacatgcgggtggtgtggttatttcgccgaccacg
atcaccgattttgcgccactttattgtgacgaagaaggtaaaaatccggtaacgcaattt
gataaaaatgatgttgaagatgccggtttagttaaatttgattttcttggtttacgtact
ttaacgatattgcagtgggccattgaaatggcggacgcaaaactgttaaaacagggaaaa
gaaccgatcaatttagccggtattgatcttgaagataaagccagttttaaagtcttatta
aaatcggaaacaaccgcggttttccaacttgagtctagcggtatgaaatcgctgattgca
aaactaaaacccgattgctttgaagatatcattgctttggtggcgctgtttagacctggg
cctttgcaatcaggcatggttgataactttatcgaacgtaaacatggccgtgaagcgatt
agttacccagatgaaacttggcaacatcttgacttaaaaccaattcttgaaccgacttac
ggaattattctttatcaagaacaggttatgcaaattgcgcaggtacttgccggctattca
ttaggtggcgctgatatgttacgtcgtgccatgggtaagaaaaagccagaagaaatggca
aaacagcgagcgggttttgaagccggtgcgataggtcgtggcgttgatggcgagctggcg
atgaaaatttttgatttggttgaaaagtttgcgggttatggttttaataaatcgcattct
gccgcttatgccttagtgtcttatcaaactctgtggatgaaaacccatttcccggcgcct
tttatggccgcggtaatgtcagctgatatggataacaccgataaaatcgttaccttagtt
gacgagtgcagcaacatgggacttgatctattaccgccggatgtaaaccgggggcaatat
aaattcacagttaatgatgacgaccaaattatttatggtattggcgctgtaaaaggtgtt
ggtgaaggcccaattgaagccataatcgctgcgcgggaaagtgacggcgagtttattgat
ttatttgatttttgcgctcgggttgatttgaaaaagatcaacaaacgggtgttagaaaaa
ttaattaaatcgggtgcaatggatgcccttggaccgaatgctaaagccggtcctcatcgt
gcggctttatttgagtctttacctgaggcgttaaaagcagctgaacaacatgctaaagcg
caagctatagggcaaaatgatttatttggcttaataaacgaagagcctgaagataataga
caagtctataaagaggttgctaagtggcctgaacaacgatggttagatggcgaaaaagaa
actttaggtttatatttaacgggtcaccctataaatcgttatttaaatgaaattaaacgt
tatgcgacaggacgtttagttagcttacaaccaacaaataaagataaaactaccgtagcg
gtaggtttggttctggctgtgcgggttttagtgaataaacgcggtcgtcgttgggcattg
gtaacattagatgacaaaagcgcccggatggatattcgtttattcccagatgactacgat
aggttcgcagaattgcttatttctgatgcaattttagtctgtagcggacaggtcagcttt
gatgattactctgggggtattacaatgaccgctcgagacataatgaccattgctgatgca
cgtgagaattatgtcacgtcattagatttacaaatcgataaaaatcagctttcgggacga
tttatcgagcaatttacacaggtgctcacaccttataaagatggtatttgcccaattcgt
gttttttatcaaagagatgaagcgaaaggtatgctagagttaggggtacagtggcgcgta
tcgccaagcgacatgctattatacgatttgaaaaccctattgggtgaagagcaagtcgag
ttaaaatttaaatag
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