Cognaticolwellia beringensis: B5D82_16550
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Entry
B5D82_16550 CDS
T05628
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cber
Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cber03016
]
B5D82_16550
Enzymes [BR:
cber01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B5D82_16550
Transfer RNA biogenesis [BR:
cber03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B5D82_16550
Prokaryotic type
B5D82_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASP49237
UniProt:
A0A222GBL4
LinkDB
All DBs
Position
3927851..3928795
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AA seq
314 aa
AA seq
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MAKKRKGRAINGVLLLDKPYDMSSNNALQRVKHIYFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGVRTTTSDADGEVVSEKPVDVSAEQLAAALDSFRGTTQQ
IPSMYSALKYQGQPLYKYAREGIEVPRESRDITVFRLDLLRFEGDEVDLDIHVSKGTYIR
TIIDDLGELLGCGAHVADLRRSAVGNYPPERMVTMATLEALLEQAQAEDVPPSVYLDPLL
LPMTTACDGIPAVFVDDMSANFLRHGNPVQCSNGPSEGLVQVFIGDDVDTGEFIGVGEID
DDGLVAPKRITVVG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaagaaaaggccgtgcgattaacggcgttttattattggataaaccctat
gatatgtcgtctaacaatgccctacagcgagttaagcacatatattttgcacaaaaagca
gggcataccggtgctttagatccattagcgaccggcatgttaccgatatgtttaggtgaa
ggtactaagttttctcagtttttacttgataccgataaaacttaccaagttaccgcaaaa
ttaggtgttcgtaccacaacaagtgatgctgacggtgaggtggttagtgaaaagcctgtc
gatgttagtgctgagcaattagcagccgcattagactcgtttcgcggtacaactcaacaa
ataccgtcaatgtactcagcattaaagtatcaggggcaacctttatataaatatgctcgt
gaaggtattgaagtaccgagagaatcacgtgacattacggtatttcggttagatctatta
cgttttgaaggtgatgaagttgacctagatattcatgtttctaaaggtacctatattcgt
accattattgatgatttaggtgaacttttaggctgtggagcacatgttgctgatttacgc
cgaagtgcggttggtaattatcctccagaaagaatggtaacaatggcaacgttagaagca
ttgttagaacaagcccaagcggaagatgttccaccgtcagtttatttagatcctttgcta
ttacctatgactacagcttgtgacggtatacctgcggtttttgttgatgatatgtcggcg
aactttttgcgccacggtaaccctgtgcaatgctcgaatgggccaagcgaggggttagtg
caagtgttcattggcgatgatgtcgatactggtgaatttattggtgttggtgaaattgat
gacgatggtttagttgccccgaagcgtattacagtcgttgggtaa
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