Cognaticolwellia beringensis: B5D82_16845
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Entry
B5D82_16845 CDS
T05628
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cber
Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cber03032
]
B5D82_16845
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_16845
Enzymes [BR:
cber01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B5D82_16845
DNA replication proteins [BR:
cber03032
]
Prokaryotic type
DNA Topoisomerases
B5D82_16845
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B5D82_16845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ASP49290
UniProt:
A0A222GBS0
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Position
4004096..4006828
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AA seq
910 aa
AA seq
DB search
MTDLANNIAPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHSILADLDKETVDYVANYDGTEMIPAVMPTRIPNLLVNGTSGIAVGMAT
NIPPHNLTEVINGCLAVIENSDITFEELLEFIPGPDFPTAGIISGRAGIQEAYLTGRGKI
KIRARARIEVDEKSGKETIVVFELPYQVNKARLIEKMADLVKEKRLEGISALRDESDKDG
MRMVIEVKRGEVGEVILNNLYKLTQMQVSFGLNMVALTNGQPKLFNLREMLDAFILHRRE
VVTRRTIFELRKARERAHLLEGLSIALSNIDPIIALIKNSPTPSEAKEQLLAQGWDLGLV
SDMLAAAGDDAARPEWVEEEFGIRDGLYFLTPPQAQAILDLRLHKLTGLEHEKIISEYKA
LLDVIAELLYILATPSRLMEVIREELEAIRDEFGDERRTEITNASHDLSMEDLITEEDVV
VTLSHEGYVKYQILSDYQAQRRGGKGKAATKMKEEDFIERLLIANTHDTILCFSDRGKLY
WLKVFQLPLASRTARGRPIVNILPLEEGERITAILPVREYAEDKFIIMATASGTVKKTAL
TAYKNQRANGIIALNLRDDDTLIGVDITDGENDIMLFSDAGKVVRFNEKKRDSETGEIKV
DPETGEQLWALKPIGRTGTGVRGIKLEGDQKVVSLIVPKNDGPILTITENGYGKRTALEE
YPAKSRATKGVVSIKVSERNGPVVGAVQVEEQDEIMLITDNGTLVRTRVGEVSVIGRNTQ
GVRIIRTIEGEHVVALQRIDEIEEVEVFEEDENGEPVPTLAAVEGEQVDTPETDESEGDD
TPLDNDDTQE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttggcgaataatattgctcctgtcaatattgaggatgagctaaaaagctcc
tatttagattacgcaatgagtgtaatcgtaggtcgtgcattaccagatgtgcgtgatggc
ttaaagccagtgcatcgtcgcgtactttttgcgatgaacgtgttaggcaacgatttcaac
aagccgtacaaaaagtctgcacgtgttgttggtgatgttatcggtaagtatcacccacat
ggtgataccgctgtttatgacacaattgttcgtatggcgcaggatttttcattacgctat
atgcttgtagatggccaaggtaacttcggttctgttgatggtgattcagcggctgcaatg
cgttataccgaaattagaatgtcgaaaattgcacattctattttggctgatttagataaa
gaaacggttgattacgttgccaactacgacggcacggaaatgataccagccgttatgcca
acgcgcattcctaacttactggttaatggtacttcaggtatcgcggtaggtatggcaaca
aatattccgcctcataacctcactgaagttatcaatggttgtttagctgttattgaaaat
agcgatatcacttttgaagaattattagagtttataccaggacctgatttcccaactgcg
ggtattatcagtggtcgagcgggtattcaagaagcttaccttaccggtcgtggtaaaatt
aagattcgtgctagagctagaatcgaagtcgatgaaaaatcgggtaaagaaacgattgtt
gtgttcgaattaccttatcaagttaacaaggctcgtttgattgagaaaatggctgacttg
gtaaaagaaaaacgcttagaaggtatttctgccttacgtgatgagtctgataaagacggt
atgcgtatggtaatcgaagtgaaacgtggtgaagtaggcgaagttattttaaataactta
tataagcttactcaaatgcaagtttcatttggtttgaatatggtggcattgaccaacggt
cagcctaaattattcaacttacgagaaatgctcgatgcctttattttacatcgtcgtgaa
gttgtaacacgtagaaccatctttgaattgcgcaaagcacgtgaacgcgcacatttactt
gaaggtttgtcgattgcactttctaacattgacccaataattgctctcattaagaactca
ccgacacctagtgaagcaaaagagcaattattagcacagggctgggacttaggtcttgtt
tctgacatgttagctgctgcgggtgacgacgctgcacgccctgaatgggttgaagaagaa
tttggtattcgtgatggtctgtatttcttaacgccaccacaagcacaagccattctagac
ttacgcttacataagttaacgggtctagaacacgaaaaaattatcagtgaatataaagcc
ttattagatgtgattgcagaattactttatattttggcaacgccttctcgattaatggaa
gttattcgtgaagagcttgaagcgattcgtgatgagtttggtgatgagcgtcgtactgaa
attactaatgcttcacatgacttatcgatggaagacttgatcactgaagaagacgtggtg
gttacgctttcacatgaaggttatgttaagtatcaaatattaagcgattaccaagcgcaa
cgtcgcggtggtaaaggtaaagcagcaactaagatgaaagaagaagatttcattgaacgt
ttattgattgctaatacccatgatactattttatgtttctcagatcgcggtaagctttac
tggttgaaggtattccaattaccattagcaagtcgtacagcacgtggtcgtccaattgtg
aatattctgccgcttgaagaaggcgagcgtattacagcaattctgccagtacgtgaatat
gcagaagataaatttattatcatggctactgcctctggtaccgtgaagaaaactgcgttg
acagcatataaaaaccaacgtgccaacggtattattgctttgaacttacgtgatgacgat
accttaattggtgttgatattaccgatggtgagaatgatattatgttgttctctgacgcg
ggtaaagttgtacgctttaacgagaaaaaacgtgacagcgaaaccggtgagataaaggtt
gatcctgaaactggcgaacaactatgggcattaaaacctattggtcgtactggtacaggt
gttcgtggtattaagttagagggcgatcaaaaagttgtgtctttaattgtaccgaaaaac
gatggcccgatattgaccattactgaaaatggctatggtaagcgtactgctttggaagaa
taccctgcgaaaagtcgagcgactaaaggtgttgtttcaattaaagtcagtgagcgtaac
ggcccagtagttggcgcagtacaagttgaagaacaagacgaaataatgttgatcacagac
aacggtacattagtgcgtacccgtgttggtgaagtcagtgttattggtcgtaatactcaa
ggtgttcgtattattcgtacgattgaaggcgaacatgttgttgccttacaacgtatcgat
gaaatagaagaagttgaagtatttgaagaagatgagaatggcgagccagtgccaacactt
gcagcagttgagggtgaacaagtagatacacctgaaactgatgagagtgaaggcgatgac
actccactcgataatgacgatactcaagagtaa
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