Cognaticolwellia beringensis: B5D82_17930
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Entry
B5D82_17930 CDS
T05628
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00061
Fatty acid biosynthesis
cber00071
Fatty acid degradation
cber01100
Metabolic pathways
cber01212
Fatty acid metabolism
cber02024
Quorum sensing
cber04146
Peroxisome
Module
cber_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
B5D82_17930
00071 Fatty acid degradation
B5D82_17930
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
B5D82_17930
09145 Cellular community - prokaryotes
02024 Quorum sensing
B5D82_17930
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cber01004
]
B5D82_17930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cber04147
]
B5D82_17930
Enzymes [BR:
cber01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
B5D82_17930
Lipid biosynthesis proteins [BR:
cber01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
B5D82_17930
Exosome [BR:
cber04147
]
Exosomal proteins
Exosomal proteins of breast milk
B5D82_17930
Exosomal proteins of breast cancer cells
B5D82_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ASP49484
UniProt:
A0A222GDM8
LinkDB
All DBs
Position
complement(4258637..4260295)
Genome browser
AA seq
552 aa
AA seq
DB search
MEKIWLEKSYPPGVEWEIDPDKYISLADLFLKYTKLYEHNTAFINMGASISYQELEQQAT
DFAAYLQQGLGLVKGDKFAIMIPNLLQYPVALFGALIAGLTVVNVNPLYTARELEHQLKN
SGTKSILILTNFAHVLEAVIDKTDVEHVIVTGVGDRLSKVKGLMVNLVLKYVKKQVPAYN
LSNAVTFNNAMASGATLNFNPVKIVGSDLAFLQYTGGTTGPSKGAMLTHRNMIANVEQSN
AATKNVYEVGKEIMVTALPLYHIFALTSNCLCFLPFGGTNLLITNPRDMPGFVKELAKYP
FTAITGVNTLFNGLLHTPGFDKLDFSPLKLGFAGGMSVQRPVAELWEKVTGTRLLEGYGL
TECAPLVTMSPYNQESYNGSIGLPAPSTDIRLIGDDGEEVTLGQPGEMWVKGPQVMKGYY
NRQDATDEVLKDGWLATGDIATMDENGFFNIVDRKKDMIIVSGFNVFPNEIEEVLVMHAG
VLEAAAIGVKHDATGEAVKVFIVKKDPNLTEKDIFDHCHKLLTNYKCPKFVEFMDDLPKT
NVGKVLRKELRK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggcttgagaagagttatccaccaggtgttgaatgggaaatagaccca
gacaaatatatttctttggcggatttatttttaaaatacactaagctttacgagcacaat
acggcatttattaatatgggtgccagtatttcctatcaagaattagagcaacaagcgact
gacttcgcggcttatttacaacaaggtttaggcttagtaaaaggcgataaatttgccatt
atgatcccgaatcttttgcaatacccagtggcattatttggtgcccttattgccggttta
accgtggtaaatgtaaatccgctctacacagcgcgtgagttagaacatcaattaaagaat
tctggcacaaaatccattcttattctgaccaattttgcgcacgtactggaagcggttatt
gataaaactgacgtagaacacgttattgttaccggtgttggtgaccgactaagcaaagtt
aaaggcttgatggtcaacttagtactcaagtacgtaaaaaaacaagtaccagcgtataac
ttatcaaatgcagtaacatttaataatgctatggctagtggcgcaacacttaactttaac
cccgttaaaattgtgggctctgatctcgcttttttacagtataccggtggtacaacgggt
ccttcaaaaggggcgatgttaacgcaccgcaatatgatcgcgaatgtagaacaatctaac
gcagctactaaaaatgtctatgaagtcggcaaagaaattatggtaaccgctttaccgctt
tatcatatctttgcgctaacctctaactgcctgtgttttctgccttttggtggtactaac
ctgttaattactaatcctagagatatgcccggttttgttaaagagctcgctaaatatcct
ttcactgccataaccggcgttaacaccttatttaatggcttattacataccccaggcttt
gataaacttgactttagtccattaaaacttggttttgctggcggtatgtcagtgcagcgt
cctgtggctgaattatgggaaaaagtgacaggtacacgtttattggaaggttatggttta
acggaatgtgcaccattagtgaccatgagtccttacaaccaggaaagttacaatggttca
atagggcttcctgctccctcaacagatattcgtttaattggtgatgatggtgaagaagtc
acattaggccaacccggtgaaatgtgggttaaaggcccacaagtaatgaaaggttattac
aatcgccaagacgccaccgatgaagtattaaaagacggttggttagcaaccggcgatatt
gccaccatggatgaaaatggctttttcaacattgtagatcgtaaaaaagatatgatcatc
gtctcgggctttaacgtttttccgaatgaaatagaagaagtgcttgtgatgcatgctggt
gtacttgaagccgcggccattggtgtcaaacatgatgctaccggtgaagcggtaaaagtg
ttcattgttaaaaaagatccaaacttaaccgaaaaagatattttcgatcactgtcataaa
ttgctgactaattataaatgtccaaaatttgttgagtttatggatgatttaccaaaaacc
aatgtgggtaaagtattgagaaaagaattacgaaaataa
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