Cognaticolwellia beringensis: B5D82_18360
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Entry
B5D82_18360 CDS
T05628
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cber
Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cber01011
]
B5D82_18360
Enzymes [BR:
cber01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B5D82_18360
Peptidoglycan biosynthesis and degradation proteins [BR:
cber01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B5D82_18360
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM3_NFP
DUF3071
DUF6884
Motif
Other DBs
NCBI-ProteinID:
ASP49564
UniProt:
A0A222GDW8
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Position
4358909..4360561
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AA seq
550 aa
AA seq
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MKYKTLSIATVLLLSGCQSISNQNESNQLEANSGNQVLIDVASAGDINQALLVDEAIDVI
HPVADGNVDLGNDDQESYLTDDVWQRIRSKLQFTIPENPRVASQRAWFVKHPTYLNRVAK
RAEPFLYYIVEALEANDIPIEIALLPIVESAFDPFAYSHGRASGMWQFVPGTGKRFGMKQ
NWWYDGRRDVVASTQGAIQYLKYLNKFFDGDWMLALAAYNSGEGRVRRAVRKNQKKNLPT
DFWSLDLPKETRAYVPKLLALADIVKRSDELKIKLHEIDNSSVITQVDIGSQLDLAKAAQ
LADLTLTELQRLNPGFNRWATDPDGPHHLLLPNHKIAAFEQGLAKLSKKERLAWQRYKIK
SGDSLGKIAQKFNTEIDLIKQVNNVKGNQIRAGKFLLIPVATASLDSYLLSQNQRLAKTQ
NKVLAGEKRIHIVKSGDTLWDIGRAYKVSTRSIAKWNAMAPRDTIKPGQKLVIWQKTDVK
ALTANTLTPSEQAIMRNINYRVRKGDSFARIADKFNVTIKDIERWNSLNREKYLQPGQML
KLSVDVTNNI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataaaaccttatctatcgcaaccgtactattattgtccggttgccaatcaatt
tcaaatcaaaacgaatcgaaccaacttgaagctaactcaggaaatcaagtacttatagac
gtagcttcagcaggagatattaatcaggcattactggttgatgaagccattgacgttatt
catccggttgccgatggcaatgtcgaccttggaaatgacgatcaagaaagctacttaacc
gatgatgtttggcaaagaattcgcagtaaacttcaatttacaataccagagaatcctcgt
gtcgctagtcaaagggcttggtttgttaagcaccctacatatttaaatcgtgttgcaaaa
cgggcagagcctttcttgtattacatcgttgaagctttggaagcgaacgatatacctatc
gaaattgctttattacctattgttgaaagcgcatttgacccttttgcctactcccatggc
cgagcgtctggcatgtggcaatttgtacctggtacaggcaaacgttttggcatgaaacaa
aattggtggtatgacggacgccgagatgttgttgcttcaacccaaggtgctattcaatat
ttaaaatatttaaacaaattttttgatggcgattggatgcttgcattagcagcatacaac
tccggtgaaggtcgggtaagacgagcagttagaaaaaaccaaaagaaaaaccttccgacc
gacttttggtctctagatttacccaaagaaacgcgcgcctatgtgcctaaattattagcg
ttagctgacattgttaaacgtagcgatgaattaaaaattaaattgcacgaaattgataat
agctcggtgatcacccaagttgatattggttcacaattagatttagccaaagccgcacaa
ttagccgatttaactttaacagagttgcaacgactcaacccaggctttaaccgctgggca
accgaccctgacggcccacatcatttattgctacccaatcataaaatagctgcatttgag
caaggcttagcaaaattaagcaaaaaagagcgtttagcttggcaacgatataaaattaaa
agtggtgacagtttaggtaaaatcgcacaaaaatttaataccgaaattgatttgatcaaa
caagtaaataacgttaaaggtaatcaaattagagcaggtaaatttttattaatacctgtt
gctacggcttcattagatagttatttgttgtctcaaaatcaacgcttagcaaaaacacaa
aataaagtactggctggtgaaaagcgcattcatattgtgaaatcaggagatactttgtgg
gatataggtcgtgcctataaagtgtcgacccgcagtattgcaaaatggaatgccatggca
cctagagacactattaagcctggacaaaagttggttatttggcaaaaaactgacgttaaa
gcacttacggctaataccctaacaccgagtgaacaagcgataatgcgtaacattaattat
cgtgtgcgaaaaggtgattcatttgcccgcattgctgataaatttaatgtcacgataaaa
gatatagagcgatggaatagtcttaatcgtgaaaagtatttacaaccagggcaaatgtta
aagctgtctgttgatgtaactaataacatttaa
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