KEGG   Cercospora beticola: CB0940_00129
Entry
CB0940_00129      CDS       T09388                                 
Name
(RefSeq) Replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
cbet  Cercospora beticola
Pathway
cbet03030  DNA replication
cbet03410  Base excision repair
cbet03420  Nucleotide excision repair
cbet03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CB0940_00129
   03410 Base excision repair
    CB0940_00129
   03420 Nucleotide excision repair
    CB0940_00129
   03430 Mismatch repair
    CB0940_00129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbet03032]
    CB0940_00129
   03400 DNA repair and recombination proteins [BR:cbet03400]
    CB0940_00129
DNA replication proteins [BR:cbet03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CB0940_00129
DNA repair and recombination proteins [BR:cbet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CB0940_00129
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_22 AAA_33 AAA_16 nSTAND3 RuvB_N AAA_14 AAA_28 AAA_30 5_3_exonuc RNA_helicase Sigma54_activat AT_hook AAA_18 NACHT AAA_11
Other DBs
NCBI-GeneID: 35423942
NCBI-ProteinID: XP_023458924
LinkDB
Position
1:292786..296521
AA seq 1091 aa
MPSDIRSFFGGKPAGTPAEKPKSKEEPKKRGRPRKVVEDDEDDDEPVAKKTSPKKSAAKK
KVEPEPELEETTASAFFGGGKPKRSEAVRPKKENTGTAQSTPQKATPKAKANGTKASGKT
SSRSKKATSYVDLDADDFPDDDMEDNADDEFKAAAKVGKRRGDDYEEGTDEDEDMIQPKR
RAAGRQKKLQDNGQDDADPDEDIDMKDTNPDDDFVVPDDDEEIVESKPAKKTPVKSSKKR
KSTAIEEDDDDDLEIEEVKPAKKRATPQKKTTAASKKAKKDAPQDSAEVQAIFDSIPTIK
PPSPPSKKDGEDGGKPKFQFGAQHANSAVPAGALSDSDMPSGAENCLAGLAFVFTGQLER
LGREQGQNLVKRYGGRIMSAPSSKTSYVVLGEDAGPKKLATIQQHKLKVINEEGLFELIR
RLPANGGSGAAAEKYAEKMAKEEEQIREQAAELEREEQERKARIAAKAAKQSPVKQASKA
APAASKSDKGKQAADGPDSRLWTVKYAPTQMSMICGNKGQVEKLQRWLRAFPKNQRTGFK
MPGPDGSGTHRAVMIHGPPGIGKTTAAHLIAKMEGYDIVESNASDTRSKKLVENGLKGTL
AATSLMGYFSQGVEDVKEANKKIVLVMDEVDGMSAGDRGGVGALAAVCKKTQVPMILICN
DRKLPKMKPFDFCTFDLPFRRPTTDQIRARIMTIAFREGMKLPPPVINALIEGSGADIRQ
VINMISQAKLDDQAMCFEDGKDMSKAWEKHTVLKPWDMVGKILGGGLFNEASKSTLNDKT
ELYFNDHEFAPLMLQENYLGTNPQRSNKYNDQPSRKRLAALELASKAADSISDGDLVDRM
IHGSQQQWSLMPTHAVFSFVRPASFVYGSMAGSQTRFTAWLGNNSKTGKLSRFVKEIQGH
MRLRVTADKNEIRQTYLPILFEKLVKRLQKEGKDAVPEIIELMDSYYLTKDDWDAILELG
VGGADMEHVKIETQAKATFTRQYNQMSHPLPFMKASQVVAPTKAPAKEKPDLEEAFEESA
DEGPDETAVKKEEDEENDLSKDKYVKQPKKRKAAATKAVASKKKKTAKDDDDDEEEEEKP
KKGKGKARAKK
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgccgtccgacattcgctcgttctttggtggcaagcctgcaggcacgccggccgagaag
cccaagtccaaggaggaacccaagaagcgaggccgaccacggaaagttgtggaagatgac
gaggatgacgacgagcctgttgcgaagaaaacttcccctaagaagtccgctgcgaagaag
aaggttgagccagaacccgaacttgaagagacgaccgcgagtgctttctttggcggcgga
aagcccaaacgttctgaagctgtgagaccgaagaaggagaacactggtactgcccagagc
acccctcaaaaggccactccgaaagccaaggccaatggcacgaaagctagcggcaagacc
tcgagccgatcgaaaaaggctacgagttacgtcgaccttgatgccgatgatttccccgat
gatgatatggaagacaatgcagacgatgaatttaaagctgcagccaaggttggcaagcgg
aggggcgatgactacgaggagggcactgatgaggatgaggatatgatccagccaaagaga
agggccgcgggcaggcagaaaaagcttcaagacaatggacaagatgatgcagatccggac
gaggacatcgatatgaaggacacgaatcctgatgacgatttcgtagtgccagacgatgac
gaggagattgtcgagagtaagccggccaagaagacgcccgtcaaaagctcgaagaagcga
aaatcgactgcaatcgaggaagacgacgacgatgacctagagatcgaagaagtgaagcct
gccaagaagcgtgcgacacctcagaagaagacgacagctgcgtccaagaaagcgaagaag
gatgctcctcaggatagcgcagaagtgcaagccatatttgatagcataccaacgataaaa
cctccgtcacctcccagcaagaaggacggtgaggatggcggcaagccaaagttccaattt
ggtgcacagcacgccaattccgccgtgcctgcaggggcattatccgattcagatatgccc
tcaggagcggaaaactgtcttgctggattagcatttgtcttcacagggcagttggagcga
ttgggccgcgagcagggacagaacctggtgaaacgctacggaggtcgcattatgagcgcg
ccatcgagcaaaaccagctacgtcgtgcttggtgaggacgctggaccaaagaagctcgcc
accattcagcaacacaagctcaaggtcatcaatgaagaaggcttgtttgagcttatacga
cgcttgcccgccaacggaggttccggcgctgcagcagaaaagtatgccgaaaagatggcc
aaggaggaggaacagatccgagaacaagctgcagagctggaacgtgaagagcaggagcga
aaggctcgtattgcggcgaaagctgcaaagcagagcccggtcaagcaggcttcgaaagct
gctccggccgcgtcaaaatcggataaaggcaagcaagcagcagatggccctgatagtcga
ttgtggactgtcaagtatgctccgacgcagatgtccatgatatgcggcaacaaaggacaa
gtggaaaagctgcaacgctggctgcgcgcttttccgaagaaccagcggaccggcttcaaa
atgcccggaccagatggctctggcactcatcgcgccgtgatgatccatggaccccctggc
atcggcaagaccactgcagcacatcttattgctaagatggaaggctacgacatcgtcgaa
tccaacgcgtctgacactcgctcgaagaagcttgttgaaaacgggctgaagggcacacta
gcagccacctctcttatgggatacttttcacaaggagtcgaggacgtcaaagaagcaaac
aaaaagatcgtcttggtcatggacgaagtcgacggtatgagtgccggagatcgtggaggt
gtgggagcactggctgcagtatgcaagaagacccaggtccccatgatcctgatctgcaat
gatcggaagttgcccaagatgaaaccattcgacttctgcacttttgatctgcctttccgt
cgacctactaccgaccagattcgagcacgcatcatgacaattgcatttcgagaaggcatg
aagctaccccctccagtcatcaacgcactgatcgaaggatctggtgccgatatcagacag
gtgatcaacatgatcagccaagccaaattggacgatcaggcaatgtgcttcgaagacggg
aaagacatgagcaaagcttgggagaagcacaccgtcctcaagccgtgggatatggtgggc
aagattcttggcggagggctgttcaacgaagcgtccaagtcgaccttgaacgacaagact
gaactttatttcaatgatcacgaatttgcacccctcatgttgcaggagaactatcttggc
acgaatccacagcggtccaacaagtacaatgatcagcctagcaggaagcgattggcggct
ttggaactggcaagcaaggcggcagactccattagtgatggagatttggtcgaccgcatg
atccacggcagtcagcagcaatggtcactcatgcccacacatgctgtcttcagctttgta
cgtcctgcaagcttcgtgtatggcagcatggctggctcgcagacgcgtttcactgcttgg
ctcggcaacaattccaagacgggcaagctgtcaagattcgtgaaggagatccaaggacac
atgcgtctgcgggtcacagcagacaagaacgagattcggcagacatacttgccgattttg
tttgagaagctcgtcaagcgcttgcaaaaggaaggcaaggatgctgtgccagagataatc
gagctcatggattcgtactacctcaccaaggatgactgggatgctattctggagcttggt
gtgggcggggctgatatggagcacgtcaagatcgagacgcaggcgaaggccacgtttact
cgacagtacaaccaaatgtctcatccgctgccattcatgaaggcctcacaagttgtagcg
ccgacaaaagctccagcgaaggagaagcctgaccttgaagaagccttcgaggaatccgct
gatgagggtcctgacgagactgccgtcaagaaagaggaagacgaggaaaacgaccttagc
aaagataagtatgtcaagcagccgaagaagcgcaaggctgctgctaccaaagctgtcgcc
agcaagaagaagaagaccgcgaaagacgatgatgacgatgaagaagaggaggagaagccc
aagaagggcaaaggcaaggctcgtgcaaagaagtaa

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