Cercospora beticola: CB0940_00220
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Entry
CB0940_00220 CDS
T09388
Name
(RefSeq) Pre-mRNA-processing protein prp40
KO
K12821
pre-mRNA-processing factor 40
Organism
cbet
Cercospora beticola
Pathway
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbet03041
]
CB0940_00220
Spliceosome [BR:
cbet03041
]
Complex A
U1 snRNP components
U1 related factors
CB0940_00220
Complex B
CB0940_00220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
35424033
NCBI-ProteinID:
XP_023459249
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Position
1:506177..509086
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AA seq
783 aa
AA seq
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MSDWAAAQAADGRTYYYNKITKETRWDPPPNVEVAPPSKGPAPTGPAGSAADWAEAKAAD
GKTYYYNKVTKETSWTLPEAVRRQQEQQQQNGRPDFVAGGGGGYGGRDDYHGGRGRRDDR
DHGLPQKPSFDRGGDRGDRGGNPWEARREQVGYGGPMPVKTDEPEYSTAEAAEEAFFKLL
KRNNITPDTEWQDALRLVIRDREYRAIKDPKERKNAFEKYCTEMRAEQKSKEKERKERAR
EDFRRMLSTHDNIEHYTRWKTARPTIEHESAFKSVGDEDERRNIFDEYVLELKKQHVENE
AKRRKDAMNELQKTLEVLILDPNTTWTDAEEKIDNNERFVTNETLKGVHKLDIFLAFENH
MKALERSANEATQKEKQLKKRKQRQARDAYKQLLSEKLQEGQIKAGSKWSDFFPLIKDDE
RFLNYLTVPVPPYPGATASNARELFWDMVEDEERKLRSKRNDALDVLEEQRFEVTLETSL
NEFTEIMHSHPKTANLNQDEVSMIFDRILQKVKRREEEKQIGAERQQKAIVDSVRTAMKK
VHPPIRLDDSYEDVVARLSGIRDWDTAEDEIRRRAYDKYMARLREKDDDRRRDRERDRSR
DYRNGSRRDDRDDRRDRDRRHRTRTPEIDAYEADRRKAQADRERQYRKASFGLTPPPRGV
DRYDERDRRDDRRDDRRRPTRDDLYESERRAREAERERNYMSRADPRDKGKTLDYGDDDV
VGSRPPSVRKRRESDASMASRRDNKRPRREGGRTRSPEPDTSLLKEEPPALQSGSEEGEI
EEI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattgggcggcggcgcaggctgccgatggccgcacgtactactacaacaaaatt
accaaggaaactcgatgggatccgccgccgaatgtcgaggtcgcacctccttccaaaggc
ccagctcccacagggccagctggcagtgctgcggattgggctgaagcaaaggcggccgat
gggaagacgtattactacaacaaagtaaccaaagagaccagctggactcttcctgaagct
gtgcgcaggcagcaggaacagcagcagcaaaacggacgtccggacttcgtggctggcggt
ggaggtggatacggcggacgcgacgactaccacggagggcgcggtaggcgcgatgaccgc
gaccacggcctgccacagaagccctcgttcgaccgaggcggcgatcgcggcgaccggggc
ggaaacccatgggaggcacgtcgagagcaggttgggtatggcggtccaatgcccgtcaag
acggatgagccagagtatagcacggccgaggctgctgaggaggctttcttcaagctgcta
aaacgcaacaatatcacgcctgacactgaatggcaggatgcactacgcctcgtcattcgc
gatcgcgagtaccgcgctatcaaggacccgaaggaacgcaagaatgccttcgagaagtac
tgcaccgagatgcgtgcagagcaaaagagcaaggaaaaggagcgcaaggagagggcgcgc
gaagacttccgccgcatgctttccacgcacgacaacatcgagcactacacacgctggaag
acagctcgacccaccatcgagcacgaatcggcgttcaagagtgttggtgatgaggacgaa
cgtcgcaacatctttgatgaatacgtgcttgagcttaagaagcagcacgtagagaatgag
gcgaagcggcgtaaggacgccatgaatgagctacagaagactcttgaagtgctgatactg
gacccaaacacaacgtggacggacgcagaagagaagatcgacaataacgagcgattcgtt
acgaatgaaacgctgaaaggcgtacacaagctcgacatcttcctcgctttcgagaaccac
atgaaggcgctcgaacgatctgccaacgaggcgacgcagaaggagaagcagttgaagaag
cgaaagcagcgacaggctcgcgatgcctacaaacagcttctcagcgagaaattgcaagaa
ggccagatcaaggcaggttcgaagtggtcagacttcttccccttgatcaaagatgatgag
cgcttcctcaactatctcacagttcccgttcctccatacccgggtgccacagcttcgaac
gcccgagagctcttttgggatatggttgaagatgaggaacgcaagctacgctcaaagcgg
aacgatgcactggacgtccttgaagagcaacgcttcgaggtaactcttgagacgtcacta
aacgaattcacagagatcatgcactcacacccaaagacggcaaatctgaaccaggacgaa
gtgagcatgatcttcgacaggattctgcaaaaggtcaagcgccgtgaagaggaaaagcag
atcggcgccgagcgacaacagaaggccattgtcgacagcgttcgcacggcaatgaagaag
gttcatcctccgattcgtttggacgacagctacgaggatgtagttgctaggctgtcaggc
attcgcgactgggacacagctgaggatgaaattcgacgacgggcatatgataagtacatg
gcccgtctcagagagaaggacgatgaccgccgtcgcgaccgcgagagagaccgtagcaga
gattaccgcaacggatctcgtcgagacgatcgagatgaccgcagagatcgcgatcgccga
catcgcacccgcacaccagagattgatgcttacgaggccgacagacgcaaagctcaagct
gatcgcgagagacagtacaggaaagcgtcctttggcctcacgccaccaccacgtggtgtc
gatcgctacgacgagcgcgaccgtcgcgatgatcgacgcgacgatcgaagacggccaacg
agagatgacctgtacgaaagcgagcgccgtgctcgcgaagctgagcgtgagaggaattac
atgtctcgtgctgatcctcgcgacaagggtaaaactcttgattatggcgacgacgacgtg
gtcggtagccggccaccgagtgtgaggaagagacgcgagagcgatgccagcatggcgagt
cgacgcgacaacaagcgaccacgccgcgaaggcggacgaacccgttctcctgagcccgat
accagcttgctgaaagaagagcctcctgcccttcaaagtggctcggaggaaggtgagatt
gaagagatctag
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