Cercospora beticola: CB0940_00221
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Entry
CB0940_00221 CDS
T09388
Name
(RefSeq) Translation initiation factor RLI1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cbet
Cercospora beticola
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbet03009
]
CB0940_00221
Ribosome biogenesis [BR:
cbet03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
CB0940_00221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_22
AAA
nSTAND3
Rad17
Fer4
AAA_15
VapE-like_dom
Fer4_21
AAA_29
SRP54
RNA_helicase
TsaE
Fer4_6
AAA_7
NACHT
AAA_24
AAA_23
NB-ARC
Fer4_10
Fer4_16
Fer4_9
AAA_13
ATPase
MeaB
Fer4_7
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
35424034
NCBI-ProteinID:
XP_023458665
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All DBs
Position
1:complement(509497..511856)
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AA seq
606 aa
AA seq
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MSDKLTRIAIVNSDKCKPKKCRQECKKSCPVVRTGKLCIEVDPSSKIAFISERLCIGCGI
CPKKCPFDAINIINLPTNLETQVSHRYSANSFKLHRLPLPRPGQVLGLVGTNGIGKSTAL
KILAGKLKPNLGRYDDPPDWEEILKYYRGSELQNYFTKILEDDLKAVTKPQYVDQIPKAV
KGTNRTVGHLVTDRSQVSKERLEEITEALELIQVWDRDIDLLSGGELQRFAIAMVCVQKA
DVYMFDEPSSFLDVKQRLAAGRIIRSLLRPDCYVIVVEHDLSILDYLSDYICCLYGKPAV
YGVVTAPFSVREGINIFLDGNIPTENLRFREESLQFRIGDASDEFMADKNRDYVYPNMTK
TMGGFNLTIESGEFTDSEIIVMMGENGTGKTTFCKMLAGALPPDDGKKIPPMNISMKPQK
ITPKFQGTVRQLFFKKIKAAFLSPQFQTDVYKPLKMDDFIDQEVQNLSGGELQRVAIVLA
LGIPADIYLIDEPSAYLDSEQRIVAARVIKRFIMHAKKTAFIVEHDFIMATYLADRVIVF
DGQPSVKSRANRPQSLLTGCNTFLKNLDVTFRRDPNTYRPRINKLNSQLDTDQKSSGNYF
FLEDDS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaattgacacgtattgcaattgtcaactcagacaagtgcaagccgaagaaa
tgtcgtcaagagtgcaaaaagtcctgtcccgtggtgcggacgggaaagctgtgcatcgaa
gtcgacccctccagcaaaatcgccttcatctctgaacgcctctgcatcggatgcggtatc
tgccctaaaaagtgccccttcgacgccatcaacatcatcaacttgcccacgaacctcgaa
acgcaagtctcccaccgctacagcgccaacagcttcaagctgcacagactgcccttgcca
cgaccaggacaagtgttgggtttggtgggaaccaacggtattggaaagagtacggcattg
aagattttggctgggaagctgaagcccaacttgggacgatacgatgatcctccggattgg
gaagagatcctgaagtactacagaggatcagaactgcaaaactacttcaccaagattctt
gaggatgacctgaaggctgtcaccaagcctcagtatgtcgatcaaatcccaaaggccgtg
aaaggcaccaatagaaccgttggccacttggtcaccgatcgttcgcaagtgagcaaggag
agactcgaagagatcaccgaagccctagaactgatccaagtctgggaccgcgatatcgat
ctcttgtccggtggtgagttgcaacgtttcgccattgccatggtctgcgtgcaaaaagcc
gatgtctacatgttcgacgagccttcctcgttcttggatgtcaagcaacgtcttgccgct
ggtcgaatcatccgcagtcttctccgcccagactgctacgtgattgtcgtcgagcacgat
ctgtccattctggattatctttccgattacatttgttgtctctacggaaagccagccgta
tacggtgtggttaccgcccccttctcggtccgtgaaggtatcaacattttcttggacggc
aacatcccaaccgagaacttgcgtttcagagaagaatctcttcagttccgtattggagat
gccagcgacgaattcatggccgacaaaaaccgcgactacgtatacccaaatatgaccaag
actatgggtggcttcaacctcaccatcgagtctggtgagttcaccgactctgagatcatc
gtcatgatgggtgagaacggtaccggaaagacgactttctgtaagatgctggctggagcg
ttgccaccggacgatggcaagaagatccctcctatgaacatctcgatgaagccgcagaag
atcacacccaagttccagggcactgtgcgtcagctcttcttcaagaagatcaaggccgca
ttcctctccccacagttccagacagatgtctacaagccattgaagatggacgacttcatc
gaccaagaggtccagaacctgtctggtggtgaattgcagcgtgtcgctattgtgttggcc
ctcggtatcccggccgacatctacctcatcgacgaaccttcggcctacttggactccgaa
caacgtattgtcgcagcacgcgtcatcaagcgtttcatcatgcacgccaaaaagacagcc
ttcatcgtcgagcacgatttcatcatggccacctacctcgccgaccgcgtcatcgtcttc
gacggccagccatccgtcaagtctcgtgccaacaggccacaatctctcttgacaggttgc
aacaccttcttgaagaacttggacgtcactttccgtcgtgatccaaacacttaccgtcca
cgtatcaacaagctgaactcgcagcttgataccgaccagaagtcctcgggcaactacttc
ttcttggaagacgattcttga
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