Cercospora beticola: CB0940_00324
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Entry
CB0940_00324 CDS
T09388
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cbet
Cercospora beticola
Pathway
cbet03013
Nucleocytoplasmic transport
cbet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CB0940_00324
03015 mRNA surveillance pathway
CB0940_00324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_00324
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CB0940_00324
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CB0940_00324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
ATP-grasp_6
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
35424137
NCBI-ProteinID:
XP_023459131
LinkDB
All DBs
Position
1:complement(810957..813101)
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AA seq
520 aa
AA seq
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MSTEPDAPKLGGLSLGDEKSTNSPANGTKANPAAAIFTPSGPGFKWSDEDDSTATGSDKK
TGGDGADKKDLEKAQVDGAGHFMAGSKGLNEPEFDVNVKLADLQEDPNNPLYSVKKFEEL
SLKEELSTGLDLMGFQKPSKIQERALPLLLKDPPQNFIGQSQSGTGKTAAFVLNVLQRVD
LSINKPQALILAPTRELARQIAGVATTMGIKLLEKGLRISQSVPDPETRGKPVEGQVVVG
TPGTVMDQLKRRLLDARGIKVLTLDEADNMLDLQGMADQCKRVKQQLPRTAQVVLFSATF
PPDVLAFAEQFSPKSNMITLKVEELSVKGIRQMYLDCQNDEEKYAALLKFYGLMTIGSSV
IFVKHRETAVQIDKRMTAEGHNVASLTGAKEGAERDETFRKFQKGEAKVLIATNVLSRGI
DVSTVTMVVNYDIPETVDGQPDFETYLHRIGRTGRFGRTGAALSFVHDRKSWQSLMAICK
HFGVEPTKLDTSDWDEVERNIKAIMKNSRNNINIEEIDMS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagaaccagacgcgccgaaactcggcggcctcagcttgggcgacgaaaagagc
accaattcccccgcgaacggtacgaaggccaaccctgccgccgcgatttttacgccatcc
ggtcctggcttcaaatggtccgatgaggatgactcgaccgcaacgggctctgacaagaaa
acaggcggtgacggagcggacaagaaagatctcgagaaggctcaggtcgatggcgccggt
cacttcatggcgggctccaaaggcttgaacgagccagagtttgacgtcaatgtcaagttg
gcagatcttcaagaggacccgaacaatcctctttactcagtcaagaagtttgaagagttg
tcgctgaaagaagagctcagcactggtctggaccttatgggattccagaagccctccaag
attcaggagcgcgcacttccactgctgctcaaggacccacctcagaacttcatcggtcaa
tcacaatctggcacaggcaagactgccgctttcgtcctcaacgttctccaacgcgttgac
ctttccatcaacaagccacaggcgctgattctcgcaccgactcgagaactcgctcggcag
atcgctggagtcgcgacgaccatgggcatcaagcttctggagaaaggcttgcgaatctcg
caatcggtgccagacccagagacccgtgggaagcccgtcgaggggcaagtcgttgttggc
acaccaggcacagtgatggatcagctgaagcggcggctactcgatgcacgaggcatcaaa
gtccttacgctcgatgaggcggacaacatgctcgatctgcagggcatggcagaccagtgc
aagcgtgtcaagcagcaattgccgaggaccgcccaggtcgtgctgttctccgcaactttc
ccaccagacgttttggcctttgccgagcagttctcacccaagtcgaatatgatcaccttg
aaggtcgaggagctgtccgttaagggcatccgacagatgtacctggactgccagaatgac
gaggagaaatacgccgcccttctcaaattctatggcctcatgacgattgggtcatcagtc
atcttcgtcaagcacagagaaacagcggtccagatcgacaagcgcatgacagccgagggc
cacaatgttgcctctctgacaggtgcaaaggagggcgcagagcgcgacgagactttccgg
aaatttcaaaagggtgaggcaaaggtgctgattgccaccaatgtgctgtcccgtggtatc
gacgtctccactgtcaccatggtggtcaattacgacattccagagacggtggatggtcaa
ccagattttgaaacctacttgcatcgcatcggacgtaccggtcgtttcggtcgcacaggt
gctgcgctcagcttcgttcacgaccgcaagagctggcagagtctcatggccatctgcaag
cacttcggtgtcgagcccaccaagcttgacaccagcgactgggacgaggtggagcgtaac
atcaaggcgatcatgaagaactctcgcaacaacatcaacatcgaggagatcgacatgtct
tga
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