Cercospora beticola: CB0940_00500
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Entry
CB0940_00500 CDS
T09388
Name
(RefSeq) DNA-directed RNA polymerase II subunit rpb7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
cbet
Cercospora beticola
Pathway
cbet03020
RNA polymerase
cbet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CB0940_00500
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_00500
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_00500
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_00500
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CB0940_00500
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CB0940_00500
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CB0940_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
35424312
NCBI-ProteinID:
XP_023458684
LinkDB
All DBs
Position
1:1285845..1287066
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AA seq
171 aa
AA seq
DB search
MFFVAHRTRDCTLHPSFFDNTADSRIRERLYEDMEGKVEGTEMIIQIIEIDEISEPVLVP
GTGMAKYTLSYRAIVWRPFRGEVVDGQVTSVVNNGFFVDVGALSVFVSKAMIPPALKYSV
EGSTPSFTDNSDQTIERGAQVRLRIKGIRGEMGSMYAIGSIREDYLGALLQ
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcgttgcgcaccgaacacgcgactgcacgctccatccgtctttcttcgacaac
accgcagacagcaggattcgcgagaggctttacgaagacatggaggggaaggttgagggc
acggaaatgatcattcaaatcatcgagatcgatgagatcagtgagccagtgctggtgccg
ggcacgggaatggcgaagtacacgctctcgtatcgtgcgatcgtatggcgacctttcaga
ggtgaagtggtggacggacaggtgacgagcgtggtcaacaatggattcttcgtggacgtg
ggcgcgttgagtgtgtttgtgagcaaagcgatgatcccacctgctctcaaatactcagta
gagggctcgacgccttctttcacggacaactcagaccagaccatcgagcgaggcgcacaa
gtgcggctacgcatcaagggtattcgcggagagatgggcagcatgtatgccatcggtagc
atccgcgaggattaccttggggctcttttgcagtaa
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