Cercospora beticola: CB0940_00587
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Entry
CB0940_00587 CDS
T09388
Name
(RefSeq) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbet
Cercospora beticola
Pathway
cbet03420
Nucleotide excision repair
cbet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_00587
03430 Mismatch repair
CB0940_00587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_00587
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CB0940_00587
DNA repair and recombination proteins [BR:
cbet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CB0940_00587
MMR (mismatch excision repair)
Other MMR factors
CB0940_00587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
35424399
NCBI-ProteinID:
XP_023458336
LinkDB
All DBs
Position
1:1581539..1584754
Genome browser
AA seq
1057 aa
AA seq
DB search
MSRRPRFEHHQQHLSHHTTSHVMDNILQGLNPAQKDAVASDSSVLQVLAPPGSGKTKTLT
ARVAYLIAHRGLQPWNIIVCTFTVKAASEMKERITSFVGPELAKQLKLGTFHSVALRYLN
AYGQHIGLPKDFGIADTSDTKAILKRLIKQLGLSIEPGPALGRISSRKVKGEPTKNAPKS
VDQQEFTRLFDEYEATLAASNLLDYDDILLRCSFLLKSHPQCVANVQAVLIDEFQDTNNI
QYDLMTLFAQRHNVITIVGDPDQSIYGFRAAEIKNLSRMKKQWPDTLTINLEENYRSSGA
ILHAAQNVIEQDESRPPKKLQATHTFGLRPVLRKLPSATAEADWLVSEIKRTRCISGNMM
DLSDYAILLRSAALSRAIETALGNAGLAYRMVGGLRFYDRVEVKLVVDYLRVIHQPDNSE
AVERILNVPSRHIGETTIKKWRAEAQSKATSLWSLILGIAQGRHKSETKIMEKTLKGLSS
FVDVILSGRKKVESWTLEKDAAPSVVDLINLISQKIKLQSYLRDKFQAEETFEARWTNVE
ELMAQAAEITKPESLAQVVELDGLPVLDDIEQRLDTDQDLLSSFLDNIALTASAEKKADD
ENEKVQQITISTIHAAKGLEWPVVFIPACYNGSIPHSRADDNDEERRLLYVGMTRAQALL
YLSCPVKNTQRETTDMSSFLTHSGVGSFFEEHGPSLPTAALTSLSITLRKECPDEAKLAE
VRKTLERDEDNYWPLNGEEPAEELSKWNRAKPGQSFSHAGFVTAQTHTMTSVQQGFSTAT
ATMPVQQGFVSVAARYDELMEQAQLRKVEKRIEQKQHQDKFESSTSASASAAVPKGRKRQ
IAGQGSIASFFSNSNNTGTGPAALKKQKSNASVEESDAVLDISHKSTASATTSARPQPLR
EISNISDTRSTSAAAAGFMTAKQGGLPTHKPRSTPMFTKPASSMQTGRGRQRQNHENNDC
THDEDDDAVQKEETYVFLSSSPAKPEPDHDTKVYSTTASKAEHGSKAGGYSESFQPASTL
HATSMSNLAAKSALSQQQRKTLGVRRSMNGWAARMNR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacgtccgcgcttcgagcatcatcaacaacatctctcccaccacacgacaagc
catgtcatggacaacattctgcagggcctgaatcctgcacagaaggatgccgtggcctct
gacagctccgtgctacaggtgctggcaccgccgggctcgggcaagacgaagactctcaca
gcacgcgtcgcgtacctgatcgcgcatcgcggattgcagccatggaacatcatcgtctgc
acattcaccgtgaaagcggcgagtgagatgaaagaacgaatcacgagctttgtcggacca
gagttggcgaaacagctcaaactgggcactttccattcggtggcgttgcgatacctcaat
gcctacggacaacacattggtctgccgaaagactttggaatcgcggatacctcggacaca
aaggccatcttgaagcggctcatcaagcagcttggactctcaattgagcccggtccagct
ctcggtcgaatctcgtctcgaaaagtcaaaggcgagccgacgaagaacgcgccgaaaagt
gttgatcagcaagaattcacgcgactgtttgacgaatatgaggcgacgctggcagcctca
aatcttctcgactacgacgacattctgctacgatgttcattcttgctcaaaagccacccg
caatgtgtggcgaatgtgcaagctgtcttgatcgatgagttccaagacacgaacaacatc
caatatgatctgatgacactcttcgcgcagagacataatgtcatcacgatcgtcggcgat
cctgatcagagcatctatggctttcgagctgccgagatcaagaacttgtcaaggatgaaa
aagcaatggcccgatacccttacaatcaatctcgaagagaattatcgatcatccggcgcc
atcttgcatgctgcacagaatgtcatagaacaggatgaaagccgcccaccgaagaagttg
caggcaacacataccttcggcttgcgtccagtgctgcggaaactgccatcagccactgcg
gaggcggactggttggtgtcagaaatcaagcggactcgttgtatttctgggaacatgatg
gatctcagcgactatgccatcttattacgatcagcagcgctctcgcgggccatagagacg
gctctgggcaatgcgggacttgcttatcgcatggtgggcggtttacgattttatgatcgc
gtcgaagtgaaactcgtagttgactacctgcgagtaattcatcagcctgacaatagcgaa
gcggtggaacgaatcttgaatgtgccttcgcgacatatcggagagactaccatcaagaag
tggcgagcagaggcgcaaagcaaagccacgtctctgtggtcattgatactgggcattgct
caagggcggcataagtcggagactaagatcatggagaagacattgaaaggactttcaagt
ttcgtggatgtcatcctcagtggtcgcaaaaaggtggagtcgtggacactcgagaaagac
gcagcgccatcagtggtggacctgatcaatctgatctcgcagaagatcaagctgcagtca
tatctgagggacaagttccaggcggaggagaccttcgaggcacgctggaccaatgtcgaa
gagctcatggcacaagcagcggagatcaccaagcctgaaagcctggcacaggttgtcgag
ctggacggcctgccagtacttgatgatatcgaacaacgactggacacagaccaagacctg
ctgtcaagctttcttgacaacatcgctttgacagcatctgcggagaagaaggcagatgac
gagaatgaaaaggtgcaacagatcacaatctcgaccatacacgccgcaaaaggcttagag
tggcctgtggtgttcattcctgcatgctacaatggctccataccacactcacgtgctgac
gacaatgatgaggagcgtcgtttgctctatgtcggtatgacgagagcgcaggctctgcta
tatctgagctgccccgttaagaacacccagcgtgagacgaccgacatgtcctctttcctc
acccattcaggggtgggcagtttcttcgaagagcatggcccaagtctgcctacggcagca
ctgacgagtttatcgatcacgctgaggaaagaatgtcccgacgaggcgaagctggctgag
gtgagaaagacactggagcgtgatgaagacaactactggcctctgaatggcgaggagcct
gccgaggagctctcaaaatggaaccgtgcgaagcctggccagtccttctctcatgccggg
ttcgtaacggcgcaaacgcacacaatgacatccgtgcagcaaggattctccactgcaaca
gcaacaatgcccgttcagcaaggttttgtcagcgtggctgcgcgctatgacgaactcatg
gaacaagcacaattgcggaaagtcgaaaagcgaatcgaacagaagcaacaccaagataaa
ttcgagagttcaacgtcagcatcagcatccgcggctgtacccaaaggccgaaaacggcag
atcgctggccaaggcagtatcgcgagcttcttttcgaatagcaacaacactggcactgga
ccggctgctttgaagaaacaaaagtccaacgcctctgtcgaggaaagcgatgctgtactt
gatatctctcataagtcgacggcttcagcgaccacgagcgcgagacctcaaccactgcgt
gagatctcgaacatatcggatactcgcagcacatctgccgcggcagcaggcttcatgacc
gccaagcaaggcggtctaccaacgcacaaaccacgctcgacaccaatgttcaccaaacct
gcttcttcgatgcagacaggtcgaggacgacaacggcagaaccacgagaacaacgactgt
acccatgatgaagacgatgatgcggtgcagaaagaagagacatacgtcttcttgtcgagt
tcacctgcaaagcctgaaccggatcatgataccaaggtttattcaacgacagcgtcgaaa
gcagaacatgggagcaaggcaggcgggtactccgagtctttccagcctgcgagtacactc
catgcaacgtccatgagcaatttggccgctaagagcgcactatcgcagcagcagagaaag
actctgggcgtccggagaagcatgaatggctgggctgcgaggatgaatagatag
DBGET
integrated database retrieval system
