Cercospora beticola: CB0940_00885
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Entry
CB0940_00885 CDS
T09388
Name
(RefSeq) Pre-mRNA-processing ATP-dependent RNA helicase prp5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cbet
Cercospora beticola
Pathway
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbet03041
]
CB0940_00885
Enzymes [BR:
cbet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CB0940_00885
Spliceosome [BR:
cbet03041
]
Complex A
U2 snRNP components
U2 related factors
CB0940_00885
Complex B
CB0940_00885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
35424697
NCBI-ProteinID:
XP_023458648
LinkDB
All DBs
Position
1:complement(2381825..2386025)
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AA seq
1150 aa
AA seq
DB search
MARSPDRRGDYARDRRDDRDRYRDRSRDRRYDGHGRDRERERDWDRRDRGSDRYERRPRD
DRSYRRESPDRERSRDHRHHSRRQQSPVRDSRDYGRRRPREGDDRHGNDDRQSKRKRTDS
PGRSETSSRPGTANGDGSRPPSRAAEEAEKKKAQAEKLARVQAWKAAKAGKPAAGDGTPT
TADIASPTSSQQPSTPVSASQPKFDPKAIKKQIDKKSKVSNATLGDDAAIPAGTSADSAS
IAKRAPSKPVVLGAADAKITGFGLNKAANERQPDKLNVSKTGNALDEDEGEQRKFRKLPD
LALEATDGSTVPDGADDEHDDDDHDELRSDEEEAEAARLAAQKRAEEAHAEQQDIAMADA
KSSEQNGQAAGNEAEAMEVDEDIDPLDAFMNNLDQDIERQPRPRSLGKRSNREPQLFDED
DGPDLDAVGENPEDLLRGGGKRNKKEVAAVDHSKVDYEDFEKNFYRESAEVSEMSAEDVT
TLRAELDNITVRGIDQPKPITKWSQCGFGAQILDVIKANKFESPTSIQSQALPAIMSGRD
TIGIAKTGSGKTLAFTLPMFRHIKDQRPVANLEGPIGLIMAPTRELAVQIHRECKPYLKA
LNLRGVCAYGGAPIKDQIAELKRGAEMVVCTPGRLIDLLAANQGRVTNLRRVTYVVLDEA
DRMFDMGFEPQIQRILGNIRPDRQTVLFSATFPKKMETLARKALTRPIEIVVGGRSVVAA
EITQMIEVRPEETKFRRVLELLGNLHEADEDARSLIFVERQETADQIFKELHKKGYTSVS
VHGGREQIDRDQAILDFKAGAIPIMVATSVAARGLDVKQLKLVINYDSPNHGEDYVHRAG
RTGRAGNTGTAVTFLTPEQEHYAPFLVRCLEDSKQEVPETLKEMAASHKKKVQAGQASKA
GSGFGGHGIERLDAARAAERAREKNLYKTGDEPDEEDDGKKDKDKKETEVEKLVAKAAGK
VTERDAQAEQSEEKPKSTGDIMRSDLAAHLSNALKVQKTEIPAANTPALNDPVAKAAAAA
AAINGRLGTKGATRPGAPIDNRGPDAGAFHSTLEINDFPQKARWAVTNRTNVAKILEATG
TSITSKGEYYPPGKEVGPNDAPKLYILVEGDTEIAVQSAMRDLSRHLTEGTIQAQEAEAR
SGGGGRYKVI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctcaccagaccgcaggggcgactacgcgcgcgaccggcgtgacgatcgcgac
cgctaccgtgaccgcagtcgagatcgtcgctacgatggccacgggcgtgaccgagagcgc
gaacgcgattgggataggagagatcgcggcagtgaccgatacgagaggcgcccacgcgat
gatcgcagctatcgcagagagtctccggaccgcgagcggtcaagggatcacagacaccat
tcgagacgacaacaatctccggtgagagacagtagagactatggacgtcgtcgtccgcgc
gaaggcgacgataggcacggtaacgacgacaggcaatcgaagcgcaagagaaccgattct
ccgggacgcagcgagacatcctcacgaccaggaaccgcgaacggcgatggctcgagaccc
ccctctagagctgccgaagaggccgagaagaagaaagctcaagcagagaagctcgcccga
gtccaggcctggaaagcagcaaaagccggcaagcctgccgccggtgatgggactccaaca
accgccgacatcgcatccccaacgagcagtcagcaaccatccacgcccgtatcagcatct
cagcccaagttcgacccaaaagccattaagaagcaaattgacaagaaatcgaaggtctca
aatgccactctgggcgatgatgccgccattcctgcaggtactagcgcggacagtgcttca
atcgcaaaacgcgctccatccaaaccggtagtattgggcgcagctgatgccaaaattact
ggtttcggcctcaacaaggctgcaaatgagagacaaccagataagctaaatgtgtccaag
accggcaatgctttggatgaggatgagggcgagcagcgaaagtttaggaaacttcctgat
cttgccctcgaagcgactgatgggtctaccgtgcccgacggtgctgacgacgaacacgac
gatgacgatcatgacgagctgcgtagtgacgaggaagaggctgaggcagcacgcctggca
gctcagaagcgggccgaggaagcacatgctgagcaacaggacatcgcaatggctgatgct
aagagctcagagcagaacggccaagcagctggaaacgaagcggaagcgatggaagtggac
gaagacatcgaccctctagatgcgttcatgaacaatctggaccaagatattgagcgccaa
ccacgtcctcgcagtcttggaaagcgaagcaatcgcgagccacaactctttgacgaggac
gatggccctgaccttgatgctgttggtgaaaatccggaagatttattgagaggcggaggc
aaacgcaacaagaaggaggttgcggcggttgatcacagcaaggttgattatgaggacttt
gaaaagaatttctaccgcgagtccgccgaggtctccgagatgagcgcagaggacgttacg
accttgagagccgaacttgataacatcaccgttcggggaatcgaccagcctaagccaatc
acgaaatggtcgcaatgtggtttcggcgcccagattctggatgtcatcaaggcaaacaaa
ttcgaatcgccaacctcaattcagtcacaggcgctgccagccatcatgtctggtcgcgac
accattggaattgcgaagacaggctccggcaaaactttggcctttactctgcccatgttc
aggcatatcaaagaccaacgcccagtagcaaacctggagggtcccatcgggctgataatg
gcgccgactcgagaacttgctgtacaaattcaccgtgaatgcaagccctacctcaaggcg
ctcaacttgcgcggtgtctgcgcctacggcggagcgcccattaaagatcagattgccgaa
ctcaagcgaggtgcggagatggtggtatgtacgccaggccgtctgattgatctccttgct
gctaaccagggacgtgtcacgaatttgcgacgagtcacttatgtggtccttgacgaagct
gatcgcatgttcgacatgggattcgagccgcaaatccagagaatactgggcaacatccgg
cctgaccgtcaaacggtactgttctcggcaacattccccaagaagatggaaactcttgct
cggaaggctcttacgagacctatcgaaatcgtcgtgggtggccgcagcgttgttgcggct
gagatcacacaaatgatcgaagtcagacctgaggaaaccaagttccgacgtgtgcttgag
ttgcttggcaacctacacgaagcggacgaggacgcgcgatctctgatattcgtggagcgg
caagagacggccgaccagatcttcaaagaattgcacaagaagggatatacgagtgtctca
gtgcatggaggtcgcgagcagattgatcgcgaccaagctattctcgacttcaaagcagga
gccatccctattatggtggcaacgtcggtggctgccagaggactcgatgtaaagcaactg
aagctggtcatcaactacgactcccctaatcatggcgaagactacgtgcatcgtgctggt
cgtacaggacgcgctggcaatactggtactgcagtgaccttcctgacaccagagcaagaa
cactatgctccattcctggtgcgctgtctcgaggatagcaagcaggaggtgccggaaaca
ctcaaagagatggcagcttcgcacaagaagaaggtgcaagcgggacaggcaagcaaggca
ggctcgggattcggtggtcatggtatcgagaggcttgacgccgcccgcgctgccgagcgc
gcacgcgagaagaacctctacaagacgggtgacgagccagacgaggaagacgatggcaag
aaagataaggacaagaaagaaaccgaagtcgagaagcttgttgctaaagctgcaggcaag
gtcacagagcgcgatgcacaggccgagcagtctgaggagaagcccaagagtaccggcgat
atcatgcgcagcgacctggcggctcatctgagcaacgcgctcaaggtgcagaagacggaa
atcccagccgccaatacccctgccctcaacgatcctgttgccaaagcggcggccgctgca
gctgccattaatggtcgtctgggtaccaaaggagcgacgcgtccaggagctccaatcgac
aaccgcggtcctgacgcaggtgccttccattccaccttggagatcaacgatttcccgcag
aaggctcgctgggctgtcacgaatcggacgaacgtcgcgaagatcctcgaggcaacgggc
acttccatcacttcgaagggagagtactatccgccaggcaaagaggtgggtcccaacgac
gctccaaaactgtacattttggtggagggcgacaccgagattgctgtgcagtcggcaatg
cgcgacttgtctcgccatttgactgagggcacgatccaagcccaagaagcagaggctcgc
tctggtggcggtggtcgttacaaggtcatctaa
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