Cercospora beticola: CB0940_00998
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Entry
CB0940_00998 CDS
T09388
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
cbet
Cercospora beticola
Pathway
cbet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CB0940_00998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_00998
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CB0940_00998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
35424809
NCBI-ProteinID:
XP_023460291
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All DBs
Position
1:2632939..2634622
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AA seq
332 aa
AA seq
DB search
MADTAEAAPGLTFPRDTFASLAPKPFLLSHLKLPTPTRPSGRSPEQFRKPTINTGSLSHS
NGSAVIRVGDTAVVCGVRAEVLLASDIPNPPGDDVDENEIIEHLGLIVPNLELSTGCSPA
HLPGNAPGSVAQSLSYRISSLLNDSGAINLNDLRIDYVQPASDDDTIDEAGKTVTKAFWT
LYVDILCLALDGNALDAAWLAVSAALKDTQLPTARWDPDRECVICSPLSSDARSLRLHAL
PSISTFGVFTTASPLKASSNAQTWLLADPDAFEEQNCNQFMTVVTQGSDGDGQLIAKLES
SGGRQVDRQTVQTALQLAGAQSQAIRTIILGG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacagcagaggccgctcccggtctgacattcccaagagacacattcgccagc
ttggcgccgaagcctttcctgctctcacatctcaagctacccacaccgacacgaccgagt
ggaaggtcgcccgagcaatttcgcaagcctacaatcaataccggatcgctgtcgcacagc
aacggcagtgcagtcattcgtgttggagataccgcagtggtatgcggtgtacgggccgag
gtccttcttgcttccgacattcccaatccgcccggcgatgatgttgacgagaatgagatt
attgagcatctaggcctgattgtcccgaatctggaactcagcactggttgttctccagca
catttgccaggaaatgcaccaggctccgttgcgcaatcgctgtcttatcgcatttcgtcc
ctcttgaacgactccggcgccataaatctgaacgaccttcgcattgactacgtgcagcca
gccagcgacgacgacacgatagatgaggccggcaaaacggtgaccaaggcattctggacg
ctgtacgtggacatattgtgcctggccttggacggtaatgcacttgacgctgcttggttg
gctgtctctgctgcgttgaaagacactcagctgccgactgcacgctgggatccagacagg
gagtgcgtgatctgctcgccattatcttccgatgcacgctctcttcgacttcatgctctg
ccctcaatcagtacttttggggttttcactacagcttcaccactcaaggcttcgagcaat
gcacagacgtggctacttgccgaccctgacgcattcgaggagcaaaattgcaatcagttc
atgactgttgtgactcagggatccgacggagatggccagctcatcgcgaagctggagagt
agtggcgggagacaggttgatcggcagactgtgcagacggcattgcaactcgcgggggcg
caatctcaggcaatcaggaccatcatccttggaggctga
DBGET
integrated database retrieval system
