KEGG   Cercospora beticola: CB0940_01194
Entry
CB0940_01194      CDS       T09388                                 
Name
(RefSeq) putative WD repeat-containing protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cbet  Cercospora beticola
Pathway
cbet03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CB0940_01194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbet03041]
    CB0940_01194
Spliceosome [BR:cbet03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CB0940_01194
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd DSE1_N NBCH_WD40 ANAPC4_WD40 PRP4 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR90_beta-prop_4th ASA1 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_RIG_2nd PAC11 CFAP251_N Beta-prop_WDR19_1st WDR54 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N eIF2A WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_Vps41 WD40_like Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 35425004
NCBI-ProteinID: XP_023459545
LinkDB
Position
1:complement(3090298..3092416)
AA seq 522 aa
MHSARKAYIEEEDTSIDLASVPLDTNYHLPAATVGGEAQHASTVLNEFARKRKAAALAVP
TDDQRVRAELRGRGQPITLFGERKEDRRDRLREILLREQDGGAADEDESMADVEEADDAD
EEGEFYIEGSNELLAARREIARYSLPRTTRRLKRQKQESKIPVETHVKHRKEIKGKLANV
DLFGSQIASERPVSLTRFAPNGELLACGDWGGTVKLLDVPNLDTKMTLRGHKGMIGGITW
FPGATLPGSTIAPEDVNLATAAADNEIHLWSLTQDTPVASLSGHSARVCRVACHPSGRYL
ASASYDTTWRLWDVKTTTELLLQEGHSKEVYTVAFNEDGNLIASAGLDSIGRIWDLRTGR
TAMILEGHVGSIHALDWSCDGHRVMTGSADGFAKCWDLRAVRETASIGAHIGGVSDLRWF
KGTDGPLSGALQQPDAVMTDGDDQQGSSAAVQPRKSGTFLVSAGFDKNVNIFSADDWALC
KSLSGHDGTVLSVDVTADAAWLSSSGRDRTVKLWARDAMDGI
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgcattcagcgcgcaaggcatacatcgaagaagaggataccagcatcgatctcgctagc
gttccgctcgataccaattaccatctccccgctgcgacggttggcggcgaggcccaacat
gcgtcgactgtcctgaacgaatttgcccgcaagcgcaaagctgctgcgcttgcagtgcca
acagacgatcagcgcgtgcgcgcagaacttcgtggcagaggccagcccatcaccttgttc
ggggagcgcaaagaggaccgccgggaccgcttacgggaaatactgctgcgcgaacaagat
ggaggtgcggcagacgaggatgagtctatggccgacgttgaagaggcagacgatgcggat
gaggagggcgagttctacatcgagggcagcaacgaactactggcagctcgtcgagagatt
gcgagatattcgttaccacgcaccacgcgacggctcaagaggcagaagcaagagagcaag
attcctgtggagacccacgtgaagcatcgaaaagaaatcaaggggaaactcgcaaatgtg
gatctctttggcagtcagatcgccagcgagcgtccagttagcctgacgcgattcgcgcct
aatggagagctgttggcatgcggagactggggaggcacggtgaagctgcttgatgtgccc
aatctggacaccaaaatgacactgcgggggcacaaaggtatgatcggtggaattacgtgg
tttcctggcgcgaccctccccggctcgacaatagccccagaggatgtgaatctcgccaca
gctgcagccgacaacgagatacacctatggtctctgacacaggatactccagtggcatcg
ttgagcggacatagcgcaagagtatgtcgtgtggcatgccatccatctgggaggtacctg
gcaagcgcgagctatgacacgacctggcgcttgtgggatgtgaaaaccaccaccgagttg
ctgctgcaagaaggacacagcaaagaagtctacacagtcgccttcaacgaggacggcaat
ctcattgcttcggctgggcttgactcgattggtcgcatttgggaccttcgaacaggccga
actgcaatgattctcgaaggtcacgttggctcaattcatgccctcgactggagttgtgat
ggccatcgcgtcatgacaggcagtgccgatggctttgccaagtgctgggacttgcgcgct
gtacgagaaacggccagcattggcgcgcatattggtggagtctccgacctgcgatggttc
aagggcaccgatgggccactttcgggcgcacttcagcaacccgatgcagtcatgaccgat
ggggatgaccagcaggggtcaagcgcagctgtgcaacctcggaagagtggcacgttcctt
gttagtgctggcttcgacaagaatgtcaacatcttctccgcagacgactgggccttgtgc
aagtccctatcaggacacgatggcactgtcttgtcggtcgacgtgactgcagatgcggcc
tggctttcgtcaagtggacgcgatcggactgtgaagctttgggccagagatgcgatggat
ggcatataa

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